Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ndc1Q8VCB1 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ndc1Q8VCB1 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ndc1Q8VCB1 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ndc1Q8VCB1 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.6□□□□□ -0.55
Ndc1Q8VCB1 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ndc1Q8VCB1 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Ndc1Q8VCB1 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ndc1Q8VCB1 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Ndc1Q8VCB1 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ndc1Q8VCB1 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Ndc1Q8VCB1 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ndc1Q8VCB1 Gm14028-201ENSMUST00000117434 479 ntBASIC11.6□□□□□ -0.55
Ndc1Q8VCB1 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ndc1Q8VCB1 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.6□□□□□ -0.55
Ndc1Q8VCB1 Gm5070-201ENSMUST00000177599 862 ntBASIC11.6□□□□□ -0.55
Ndc1Q8VCB1 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.6□□□□□ -0.55
Ndc1Q8VCB1 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.6□□□□□ -0.55
Ndc1Q8VCB1 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.6□□□□□ -0.55
Ndc1Q8VCB1 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ndc1Q8VCB1 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.6□□□□□ -0.55
Ndc1Q8VCB1 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.6□□□□□ -0.55
Ndc1Q8VCB1 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ndc1Q8VCB1 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ndc1Q8VCB1 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ndc1Q8VCB1 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ndc1Q8VCB1 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ndc1Q8VCB1 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Ndc1Q8VCB1 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ndc1Q8VCB1 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Ndc1Q8VCB1 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Ndc1Q8VCB1 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ndc1Q8VCB1 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ndc1Q8VCB1 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ndc1Q8VCB1 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ndc1Q8VCB1 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ndc1Q8VCB1 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ndc1Q8VCB1 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.59□□□□□ -0.55
Ndc1Q8VCB1 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.59□□□□□ -0.55
Ndc1Q8VCB1 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ndc1Q8VCB1 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ndc1Q8VCB1 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ndc1Q8VCB1 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ndc1Q8VCB1 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Ndc1Q8VCB1 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Ndc1Q8VCB1 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ndc1Q8VCB1 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ndc1Q8VCB1 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ndc1Q8VCB1 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ndc1Q8VCB1 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Ndc1Q8VCB1 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ndc1Q8VCB1 Gm14208-201ENSMUST00000119645 678 ntBASIC11.59□□□□□ -0.55
Ndc1Q8VCB1 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Ndc1Q8VCB1 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ndc1Q8VCB1 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.59□□□□□ -0.55
Ndc1Q8VCB1 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Ndc1Q8VCB1 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Ndc1Q8VCB1 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ndc1Q8VCB1 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.59□□□□□ -0.55
Ndc1Q8VCB1 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ndc1Q8VCB1 Rprl1-202ENSMUST00000198476 238 ntBASIC11.59□□□□□ -0.55
Ndc1Q8VCB1 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ndc1Q8VCB1 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ndc1Q8VCB1 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ndc1Q8VCB1 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ndc1Q8VCB1 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.59□□□□□ -0.55
Ndc1Q8VCB1 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ndc1Q8VCB1 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ndc1Q8VCB1 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ndc1Q8VCB1 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ndc1Q8VCB1 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ndc1Q8VCB1 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.59□□□□□ -0.55
Ndc1Q8VCB1 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Ndc1Q8VCB1 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Ndc1Q8VCB1 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndc1Q8VCB1 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ndc1Q8VCB1 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndc1Q8VCB1 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndc1Q8VCB1 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Ndc1Q8VCB1 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndc1Q8VCB1 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndc1Q8VCB1 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndc1Q8VCB1 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndc1Q8VCB1 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.58□□□□□ -0.56
Ndc1Q8VCB1 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.58□□□□□ -0.56
Ndc1Q8VCB1 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndc1Q8VCB1 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ndc1Q8VCB1 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ndc1Q8VCB1 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndc1Q8VCB1 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ndc1Q8VCB1 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndc1Q8VCB1 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Ndc1Q8VCB1 Gm13296-201ENSMUST00000117854 997 ntBASIC11.58□□□□□ -0.56
Ndc1Q8VCB1 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndc1Q8VCB1 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.58□□□□□ -0.56
Ndc1Q8VCB1 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Ndc1Q8VCB1 Gm6963-201ENSMUST00000147879 379 ntBASIC11.58□□□□□ -0.56
Ndc1Q8VCB1 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.58□□□□□ -0.56
Ndc1Q8VCB1 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ndc1Q8VCB1 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms