Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim29Q8R2Q0 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim29Q8R2Q0 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Trim29Q8R2Q0 Gm8038-201ENSMUST00000164674 2044 ntBASIC14□□□□□ -0.17
Trim29Q8R2Q0 Gm3756-201ENSMUST00000169182 1355 ntBASIC14□□□□□ -0.17
Trim29Q8R2Q0 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.17
Trim29Q8R2Q0 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim29Q8R2Q0 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim29Q8R2Q0 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim29Q8R2Q0 Gm24934-201ENSMUST00000103764 111 ntBASIC14□□□□□ -0.17
Trim29Q8R2Q0 Gm4986-201ENSMUST00000119731 549 ntBASIC14□□□□□ -0.17
Trim29Q8R2Q0 Gm13786-201ENSMUST00000122371 333 ntBASIC14□□□□□ -0.17
Trim29Q8R2Q0 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim29Q8R2Q0 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC14□□□□□ -0.17
Trim29Q8R2Q0 Gm25043-201ENSMUST00000158604 212 ntBASIC14□□□□□ -0.17
Trim29Q8R2Q0 Gm38319-201ENSMUST00000194537 1266 ntBASIC14□□□□□ -0.17
Trim29Q8R2Q0 Gm18054-201ENSMUST00000207539 555 ntBASIC14□□□□□ -0.17
Trim29Q8R2Q0 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC14□□□□□ -0.17
Trim29Q8R2Q0 Dhrs4-202ENSMUST00000226168 828 ntBASIC14□□□□□ -0.17
Trim29Q8R2Q0 Morn2-202ENSMUST00000227729 656 ntBASIC14□□□□□ -0.17
Trim29Q8R2Q0 Gm9823-201ENSMUST00000051212 327 ntBASIC14□□□□□ -0.17
Trim29Q8R2Q0 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trim29Q8R2Q0 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trim29Q8R2Q0 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim29Q8R2Q0 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Trim29Q8R2Q0 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim29Q8R2Q0 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim29Q8R2Q0 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim29Q8R2Q0 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trim29Q8R2Q0 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim29Q8R2Q0 Gm2238-201ENSMUST00000192074 3669 ntBASIC14□□□□□ -0.17
Trim29Q8R2Q0 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trim29Q8R2Q0 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim29Q8R2Q0 Gm43075-201ENSMUST00000198613 3905 ntBASIC13.99□□□□□ -0.17
Trim29Q8R2Q0 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trim29Q8R2Q0 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim29Q8R2Q0 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Trim29Q8R2Q0 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC13.99□□□□□ -0.17
Trim29Q8R2Q0 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.99□□□□□ -0.17
Trim29Q8R2Q0 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trim29Q8R2Q0 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trim29Q8R2Q0 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim29Q8R2Q0 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim29Q8R2Q0 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim29Q8R2Q0 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Trim29Q8R2Q0 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.99□□□□□ -0.17
Trim29Q8R2Q0 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trim29Q8R2Q0 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.99□□□□□ -0.17
Trim29Q8R2Q0 Gm28882-201ENSMUST00000185504 314 ntBASIC13.99□□□□□ -0.17
Trim29Q8R2Q0 Gm42599-201ENSMUST00000201308 469 ntBASIC13.99□□□□□ -0.17
Trim29Q8R2Q0 Gm29100-201ENSMUST00000187564 4410 ntBASIC13.99□□□□□ -0.17
Trim29Q8R2Q0 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim29Q8R2Q0 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trim29Q8R2Q0 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.99□□□□□ -0.17
Trim29Q8R2Q0 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim29Q8R2Q0 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim29Q8R2Q0 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim29Q8R2Q0 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC13.99□□□□□ -0.17
Trim29Q8R2Q0 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim29Q8R2Q0 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim29Q8R2Q0 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim29Q8R2Q0 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.99□□□□□ -0.17
Trim29Q8R2Q0 Matn2-203ENSMUST00000226766 3252 ntBASIC13.98□□□□□ -0.17
Trim29Q8R2Q0 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Trim29Q8R2Q0 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim29Q8R2Q0 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim29Q8R2Q0 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Trim29Q8R2Q0 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim29Q8R2Q0 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim29Q8R2Q0 AC122197.2-201ENSMUST00000219196 1635 ntBASIC13.98□□□□□ -0.17
Trim29Q8R2Q0 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim29Q8R2Q0 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim29Q8R2Q0 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim29Q8R2Q0 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim29Q8R2Q0 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim29Q8R2Q0 Gm24830-201ENSMUST00000102024 166 ntBASIC13.98□□□□□ -0.17
Trim29Q8R2Q0 Gm13392-201ENSMUST00000117708 150 ntBASIC13.98□□□□□ -0.17
Trim29Q8R2Q0 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.98□□□□□ -0.17
Trim29Q8R2Q0 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.98□□□□□ -0.17
Trim29Q8R2Q0 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.98□□□□□ -0.17
Trim29Q8R2Q0 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Trim29Q8R2Q0 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim29Q8R2Q0 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trim29Q8R2Q0 Mir6420-201ENSMUST00000185032 102 ntBASIC13.98□□□□□ -0.17
Trim29Q8R2Q0 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC13.98□□□□□ -0.17
Trim29Q8R2Q0 Olfr284-202ENSMUST00000206647 966 ntBASIC13.98□□□□□ -0.17
Trim29Q8R2Q0 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim29Q8R2Q0 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC13.98□□□□□ -0.17
Trim29Q8R2Q0 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.98□□□□□ -0.17
Trim29Q8R2Q0 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.98□□□□□ -0.17
Trim29Q8R2Q0 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim29Q8R2Q0 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim29Q8R2Q0 Gm26232-201ENSMUST00000083360 166 ntBASIC13.98□□□□□ -0.17
Trim29Q8R2Q0 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.98□□□□□ -0.17
Trim29Q8R2Q0 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trim29Q8R2Q0 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim29Q8R2Q0 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trim29Q8R2Q0 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC13.98□□□□□ -0.17
Trim29Q8R2Q0 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim29Q8R2Q0 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms