Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm5705-201ENSMUST00000066241 711 ntBASIC15.65■□□□□ 0.1
Chmp7Q8R1T1 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp7Q8R1T1 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp7Q8R1T1 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Chmp7Q8R1T1 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp7Q8R1T1 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp7Q8R1T1 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Chmp7Q8R1T1 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp7Q8R1T1 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
Chmp7Q8R1T1 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp7Q8R1T1 Gm9361-201ENSMUST00000198695 1507 ntBASIC15.64■□□□□ 0.09
Chmp7Q8R1T1 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Chmp7Q8R1T1 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Chmp7Q8R1T1 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC15.64■□□□□ 0.09
Chmp7Q8R1T1 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp7Q8R1T1 Gm15881-201ENSMUST00000148792 942 ntBASIC15.64■□□□□ 0.09
Chmp7Q8R1T1 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC15.64■□□□□ 0.09
Chmp7Q8R1T1 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp7Q8R1T1 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC15.64■□□□□ 0.09
Chmp7Q8R1T1 Gm9797-202ENSMUST00000218003 294 ntBASIC15.64■□□□□ 0.09
Chmp7Q8R1T1 AC122408.1-201ENSMUST00000218949 218 ntBASIC15.64■□□□□ 0.09
Chmp7Q8R1T1 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp7Q8R1T1 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp7Q8R1T1 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp7Q8R1T1 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp7Q8R1T1 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Chmp7Q8R1T1 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp7Q8R1T1 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp7Q8R1T1 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp7Q8R1T1 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp7Q8R1T1 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp7Q8R1T1 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp7Q8R1T1 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp7Q8R1T1 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC15.64■□□□□ 0.09
Chmp7Q8R1T1 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC15.64■□□□□ 0.09
Chmp7Q8R1T1 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC15.64■□□□□ 0.09
Chmp7Q8R1T1 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp7Q8R1T1 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp7Q8R1T1 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC15.64■□□□□ 0.09
Chmp7Q8R1T1 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp7Q8R1T1 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp7Q8R1T1 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp7Q8R1T1 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Chmp7Q8R1T1 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp7Q8R1T1 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Chmp7Q8R1T1 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp7Q8R1T1 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Chmp7Q8R1T1 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Chmp7Q8R1T1 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp7Q8R1T1 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Chmp7Q8R1T1 AC173482.6-201ENSMUST00000225889 1741 ntBASIC15.63■□□□□ 0.09
Chmp7Q8R1T1 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Chmp7Q8R1T1 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Chmp7Q8R1T1 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp7Q8R1T1 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp7Q8R1T1 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC15.63■□□□□ 0.09
Chmp7Q8R1T1 Mup-ps26-201ENSMUST00000121751 202 ntBASIC15.63■□□□□ 0.09
Chmp7Q8R1T1 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Chmp7Q8R1T1 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC15.63■□□□□ 0.09
Chmp7Q8R1T1 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC15.63■□□□□ 0.09
Chmp7Q8R1T1 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
Chmp7Q8R1T1 Gm7395-201ENSMUST00000216059 1045 ntBASIC15.63■□□□□ 0.09
Chmp7Q8R1T1 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp7Q8R1T1 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp7Q8R1T1 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp7Q8R1T1 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp7Q8R1T1 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp7Q8R1T1 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp7Q8R1T1 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp7Q8R1T1 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp7Q8R1T1 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp7Q8R1T1 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp7Q8R1T1 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp7Q8R1T1 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp7Q8R1T1 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp7Q8R1T1 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp7Q8R1T1 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Chmp7Q8R1T1 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp7Q8R1T1 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp7Q8R1T1 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC15.62■□□□□ 0.09
Chmp7Q8R1T1 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp7Q8R1T1 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp7Q8R1T1 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Chmp7Q8R1T1 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC15.62■□□□□ 0.09
Chmp7Q8R1T1 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp7Q8R1T1 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp7Q8R1T1 Gm15573-201ENSMUST00000119487 540 ntBASIC15.62■□□□□ 0.09
Chmp7Q8R1T1 Gm14247-201ENSMUST00000120950 237 ntBASIC15.62■□□□□ 0.09
Chmp7Q8R1T1 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC15.62■□□□□ 0.09
Chmp7Q8R1T1 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp7Q8R1T1 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp7Q8R1T1 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Chmp7Q8R1T1 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Chmp7Q8R1T1 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp7Q8R1T1 Gm38228-201ENSMUST00000193169 1293 ntBASIC15.62■□□□□ 0.09
Chmp7Q8R1T1 Gm9132-201ENSMUST00000210182 832 ntBASIC15.62■□□□□ 0.09
Chmp7Q8R1T1 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC15.62■□□□□ 0.09
Chmp7Q8R1T1 CT030637.1-201ENSMUST00000228016 669 ntBASIC15.62■□□□□ 0.09
Chmp7Q8R1T1 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp7Q8R1T1 Gm6781-201ENSMUST00000038304 1242 ntBASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms