Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Prpf39Q8K2Z2 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf39Q8K2Z2 Gm10312-201ENSMUST00000078515 489 ntBASIC12.73□□□□□ -0.37
Prpf39Q8K2Z2 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.73□□□□□ -0.37
Prpf39Q8K2Z2 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf39Q8K2Z2 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf39Q8K2Z2 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf39Q8K2Z2 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf39Q8K2Z2 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.73□□□□□ -0.37
Prpf39Q8K2Z2 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf39Q8K2Z2 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf39Q8K2Z2 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf39Q8K2Z2 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf39Q8K2Z2 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf39Q8K2Z2 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf39Q8K2Z2 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf39Q8K2Z2 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.72□□□□□ -0.37
Prpf39Q8K2Z2 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf39Q8K2Z2 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf39Q8K2Z2 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.72□□□□□ -0.37
Prpf39Q8K2Z2 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf39Q8K2Z2 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf39Q8K2Z2 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Prpf39Q8K2Z2 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf39Q8K2Z2 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf39Q8K2Z2 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf39Q8K2Z2 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf39Q8K2Z2 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf39Q8K2Z2 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf39Q8K2Z2 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf39Q8K2Z2 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf39Q8K2Z2 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf39Q8K2Z2 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.72□□□□□ -0.37
Prpf39Q8K2Z2 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf39Q8K2Z2 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf39Q8K2Z2 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Prpf39Q8K2Z2 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf39Q8K2Z2 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.72□□□□□ -0.37
Prpf39Q8K2Z2 Gm43179-201ENSMUST00000198797 275 ntBASIC12.72□□□□□ -0.37
Prpf39Q8K2Z2 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf39Q8K2Z2 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.72□□□□□ -0.37
Prpf39Q8K2Z2 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.72□□□□□ -0.37
Prpf39Q8K2Z2 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.72□□□□□ -0.37
Prpf39Q8K2Z2 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf39Q8K2Z2 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Prpf39Q8K2Z2 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Prpf39Q8K2Z2 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Prpf39Q8K2Z2 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf39Q8K2Z2 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf39Q8K2Z2 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Prpf39Q8K2Z2 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf39Q8K2Z2 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf39Q8K2Z2 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf39Q8K2Z2 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf39Q8K2Z2 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Prpf39Q8K2Z2 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prpf39Q8K2Z2 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Prpf39Q8K2Z2 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Prpf39Q8K2Z2 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Prpf39Q8K2Z2 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Prpf39Q8K2Z2 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Prpf39Q8K2Z2 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Prpf39Q8K2Z2 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Prpf39Q8K2Z2 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Prpf39Q8K2Z2 Pck2-205ENSMUST00000226352 2784 ntBASIC12.71□□□□□ -0.37
Prpf39Q8K2Z2 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.71□□□□□ -0.37
Prpf39Q8K2Z2 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Prpf39Q8K2Z2 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prpf39Q8K2Z2 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Prpf39Q8K2Z2 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prpf39Q8K2Z2 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prpf39Q8K2Z2 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prpf39Q8K2Z2 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prpf39Q8K2Z2 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Prpf39Q8K2Z2 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Prpf39Q8K2Z2 Gm11930-201ENSMUST00000117788 190 ntBASIC12.71□□□□□ -0.37
Prpf39Q8K2Z2 Gm14723-201ENSMUST00000118686 215 ntBASIC12.71□□□□□ -0.37
Prpf39Q8K2Z2 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Prpf39Q8K2Z2 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.71□□□□□ -0.37
Prpf39Q8K2Z2 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.71□□□□□ -0.37
Prpf39Q8K2Z2 Gm38341-201ENSMUST00000195357 515 ntBASIC12.71□□□□□ -0.37
Prpf39Q8K2Z2 Gm18711-201ENSMUST00000199341 750 ntBASIC12.71□□□□□ -0.37
Prpf39Q8K2Z2 Gm43822-201ENSMUST00000200285 476 ntBASIC12.71□□□□□ -0.37
Prpf39Q8K2Z2 Gm19994-201ENSMUST00000217086 586 ntBASIC12.71□□□□□ -0.37
Prpf39Q8K2Z2 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prpf39Q8K2Z2 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Prpf39Q8K2Z2 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prpf39Q8K2Z2 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prpf39Q8K2Z2 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prpf39Q8K2Z2 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prpf39Q8K2Z2 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Prpf39Q8K2Z2 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prpf39Q8K2Z2 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.71□□□□□ -0.38
Prpf39Q8K2Z2 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Prpf39Q8K2Z2 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Prpf39Q8K2Z2 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Prpf39Q8K2Z2 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
Prpf39Q8K2Z2 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Prpf39Q8K2Z2 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Prpf39Q8K2Z2 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms