Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Syne4Q8CII8 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Syne4Q8CII8 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Syne4Q8CII8 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Syne4Q8CII8 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Syne4Q8CII8 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC13.83□□□□□ -0.2
Syne4Q8CII8 Gm12579-201ENSMUST00000118040 783 ntBASIC13.83□□□□□ -0.2
Syne4Q8CII8 Gm8731-201ENSMUST00000118088 412 ntBASIC13.83□□□□□ -0.2
Syne4Q8CII8 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC13.83□□□□□ -0.2
Syne4Q8CII8 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC13.83□□□□□ -0.2
Syne4Q8CII8 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC13.83□□□□□ -0.2
Syne4Q8CII8 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC13.83□□□□□ -0.2
Syne4Q8CII8 Gm17877-201ENSMUST00000192578 814 ntBASIC13.83□□□□□ -0.2
Syne4Q8CII8 AC113082.1-201ENSMUST00000217324 327 ntBASIC13.83□□□□□ -0.2
Syne4Q8CII8 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Syne4Q8CII8 Gm5537-201ENSMUST00000091117 1252 ntBASIC13.83□□□□□ -0.2
Syne4Q8CII8 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Syne4Q8CII8 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.83□□□□□ -0.2
Syne4Q8CII8 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Syne4Q8CII8 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Syne4Q8CII8 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Syne4Q8CII8 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Syne4Q8CII8 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Syne4Q8CII8 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Syne4Q8CII8 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC13.83□□□□□ -0.2
Syne4Q8CII8 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Syne4Q8CII8 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Syne4Q8CII8 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Syne4Q8CII8 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Syne4Q8CII8 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Syne4Q8CII8 Gm3765-201ENSMUST00000130985 1447 ntBASIC13.82□□□□□ -0.2
Syne4Q8CII8 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.82□□□□□ -0.2
Syne4Q8CII8 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Syne4Q8CII8 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Syne4Q8CII8 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Syne4Q8CII8 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Syne4Q8CII8 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.82□□□□□ -0.2
Syne4Q8CII8 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Syne4Q8CII8 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Syne4Q8CII8 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.82□□□□□ -0.2
Syne4Q8CII8 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Syne4Q8CII8 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Syne4Q8CII8 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Syne4Q8CII8 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Syne4Q8CII8 Gm11836-201ENSMUST00000121022 441 ntBASIC13.82□□□□□ -0.2
Syne4Q8CII8 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC13.82□□□□□ -0.2
Syne4Q8CII8 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC13.82□□□□□ -0.2
Syne4Q8CII8 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC13.82□□□□□ -0.2
Syne4Q8CII8 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Syne4Q8CII8 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Syne4Q8CII8 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Syne4Q8CII8 Gm44270-201ENSMUST00000203084 1234 ntBASIC13.82□□□□□ -0.2
Syne4Q8CII8 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.82□□□□□ -0.2
Syne4Q8CII8 AC166344.1-201ENSMUST00000223745 674 ntBASIC13.82□□□□□ -0.2
Syne4Q8CII8 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Syne4Q8CII8 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC13.82□□□□□ -0.2
Syne4Q8CII8 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.82□□□□□ -0.2
Syne4Q8CII8 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Syne4Q8CII8 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Syne4Q8CII8 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Syne4Q8CII8 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Syne4Q8CII8 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Syne4Q8CII8 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Syne4Q8CII8 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Syne4Q8CII8 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Syne4Q8CII8 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.82□□□□□ -0.2
Syne4Q8CII8 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Syne4Q8CII8 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Syne4Q8CII8 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Syne4Q8CII8 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Syne4Q8CII8 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Syne4Q8CII8 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Syne4Q8CII8 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Syne4Q8CII8 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Syne4Q8CII8 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.81□□□□□ -0.2
Syne4Q8CII8 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Syne4Q8CII8 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Syne4Q8CII8 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC13.81□□□□□ -0.2
Syne4Q8CII8 Gm15207-201ENSMUST00000119259 442 ntBASIC13.81□□□□□ -0.2
Syne4Q8CII8 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Syne4Q8CII8 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC13.81□□□□□ -0.2
Syne4Q8CII8 Gm18159-201ENSMUST00000174516 1070 ntBASIC13.81□□□□□ -0.2
Syne4Q8CII8 Gm44421-201ENSMUST00000205064 1221 ntBASIC13.81□□□□□ -0.2
Syne4Q8CII8 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Syne4Q8CII8 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.81□□□□□ -0.2
Syne4Q8CII8 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC13.81□□□□□ -0.2
Syne4Q8CII8 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC13.81□□□□□ -0.2
Syne4Q8CII8 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.81□□□□□ -0.2
Syne4Q8CII8 AC122350.1-201ENSMUST00000228135 533 ntBASIC13.81□□□□□ -0.2
Syne4Q8CII8 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.81□□□□□ -0.2
Syne4Q8CII8 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Syne4Q8CII8 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Syne4Q8CII8 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Syne4Q8CII8 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.81□□□□□ -0.2
Syne4Q8CII8 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Syne4Q8CII8 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Syne4Q8CII8 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Syne4Q8CII8 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Syne4Q8CII8 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Syne4Q8CII8 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms