Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CopaQ8CIE6 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CopaQ8CIE6 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CopaQ8CIE6 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CopaQ8CIE6 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.55□□□□□ -0.4
CopaQ8CIE6 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CopaQ8CIE6 Gm13492-201ENSMUST00000119772 665 ntBASIC12.55□□□□□ -0.4
CopaQ8CIE6 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.55□□□□□ -0.4
CopaQ8CIE6 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CopaQ8CIE6 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CopaQ8CIE6 Gm31256-201ENSMUST00000194705 506 ntBASIC12.55□□□□□ -0.4
CopaQ8CIE6 Gm37466-201ENSMUST00000195692 652 ntBASIC12.55□□□□□ -0.4
CopaQ8CIE6 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.55□□□□□ -0.4
CopaQ8CIE6 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
CopaQ8CIE6 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CopaQ8CIE6 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.55□□□□□ -0.4
CopaQ8CIE6 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.55□□□□□ -0.4
CopaQ8CIE6 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CopaQ8CIE6 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CopaQ8CIE6 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
CopaQ8CIE6 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.55□□□□□ -0.4
CopaQ8CIE6 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CopaQ8CIE6 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CopaQ8CIE6 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CopaQ8CIE6 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CopaQ8CIE6 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
CopaQ8CIE6 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
CopaQ8CIE6 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CopaQ8CIE6 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CopaQ8CIE6 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CopaQ8CIE6 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CopaQ8CIE6 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CopaQ8CIE6 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.54□□□□□ -0.4
CopaQ8CIE6 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CopaQ8CIE6 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.54□□□□□ -0.4
CopaQ8CIE6 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CopaQ8CIE6 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.54□□□□□ -0.4
CopaQ8CIE6 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
CopaQ8CIE6 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CopaQ8CIE6 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CopaQ8CIE6 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.54□□□□□ -0.4
CopaQ8CIE6 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CopaQ8CIE6 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CopaQ8CIE6 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CopaQ8CIE6 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CopaQ8CIE6 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.54□□□□□ -0.4
CopaQ8CIE6 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
CopaQ8CIE6 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
CopaQ8CIE6 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.54□□□□□ -0.4
CopaQ8CIE6 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.54□□□□□ -0.4
CopaQ8CIE6 Gm13875-201ENSMUST00000120162 282 ntBASIC12.54□□□□□ -0.4
CopaQ8CIE6 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
CopaQ8CIE6 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
CopaQ8CIE6 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.54□□□□□ -0.4
CopaQ8CIE6 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CopaQ8CIE6 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CopaQ8CIE6 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.54□□□□□ -0.4
CopaQ8CIE6 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.54□□□□□ -0.4
CopaQ8CIE6 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.54□□□□□ -0.4
CopaQ8CIE6 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.54□□□□□ -0.4
CopaQ8CIE6 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CopaQ8CIE6 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.54□□□□□ -0.4
CopaQ8CIE6 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.54□□□□□ -0.4
CopaQ8CIE6 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CopaQ8CIE6 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CopaQ8CIE6 Gm22058-201ENSMUST00000083393 310 ntBASIC12.54□□□□□ -0.4
CopaQ8CIE6 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.54□□□□□ -0.4
CopaQ8CIE6 Mir433-201ENSMUST00000093564 124 ntBASIC12.54□□□□□ -0.4
CopaQ8CIE6 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
CopaQ8CIE6 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CopaQ8CIE6 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CopaQ8CIE6 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CopaQ8CIE6 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
CopaQ8CIE6 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.54□□□□□ -0.4
CopaQ8CIE6 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.54□□□□□ -0.4
CopaQ8CIE6 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CopaQ8CIE6 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.54□□□□□ -0.4
CopaQ8CIE6 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CopaQ8CIE6 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CopaQ8CIE6 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.54□□□□□ -0.4
CopaQ8CIE6 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CopaQ8CIE6 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CopaQ8CIE6 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CopaQ8CIE6 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
CopaQ8CIE6 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CopaQ8CIE6 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.54□□□□□ -0.4
CopaQ8CIE6 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CopaQ8CIE6 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CopaQ8CIE6 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CopaQ8CIE6 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CopaQ8CIE6 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CopaQ8CIE6 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CopaQ8CIE6 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CopaQ8CIE6 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CopaQ8CIE6 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.53□□□□□ -0.4
CopaQ8CIE6 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.53□□□□□ -0.4
CopaQ8CIE6 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CopaQ8CIE6 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CopaQ8CIE6 Gm23270-201ENSMUST00000104055 131 ntBASIC12.53□□□□□ -0.4
CopaQ8CIE6 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms