Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Smc5Q8CG46 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smc5Q8CG46 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Smc5Q8CG46 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smc5Q8CG46 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smc5Q8CG46 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smc5Q8CG46 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smc5Q8CG46 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smc5Q8CG46 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smc5Q8CG46 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC15.11■□□□□ 0.01
Smc5Q8CG46 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Smc5Q8CG46 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Smc5Q8CG46 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Smc5Q8CG46 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smc5Q8CG46 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smc5Q8CG46 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smc5Q8CG46 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smc5Q8CG46 Gm23912-201ENSMUST00000104687 87 ntBASIC15.11■□□□□ 0.01
Smc5Q8CG46 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smc5Q8CG46 Gm4984-201ENSMUST00000115987 360 ntBASIC15.11■□□□□ 0.01
Smc5Q8CG46 Gm12058-201ENSMUST00000118614 437 ntBASIC15.11■□□□□ 0.01
Smc5Q8CG46 Gm13570-201ENSMUST00000140763 309 ntBASIC15.11■□□□□ 0.01
Smc5Q8CG46 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC15.11■□□□□ 0.01
Smc5Q8CG46 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC15.11■□□□□ 0.01
Smc5Q8CG46 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smc5Q8CG46 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smc5Q8CG46 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smc5Q8CG46 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smc5Q8CG46 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC15.11■□□□□ 0.01
Smc5Q8CG46 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC15.11■□□□□ 0.01
Smc5Q8CG46 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Smc5Q8CG46 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smc5Q8CG46 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smc5Q8CG46 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smc5Q8CG46 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smc5Q8CG46 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Smc5Q8CG46 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smc5Q8CG46 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smc5Q8CG46 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smc5Q8CG46 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC15.11■□□□□ 0.01
Smc5Q8CG46 Gm18782-201ENSMUST00000209023 1399 ntBASIC15.11■□□□□ 0.01
Smc5Q8CG46 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smc5Q8CG46 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Smc5Q8CG46 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Smc5Q8CG46 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Smc5Q8CG46 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smc5Q8CG46 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smc5Q8CG46 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Smc5Q8CG46 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smc5Q8CG46 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smc5Q8CG46 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Smc5Q8CG46 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smc5Q8CG46 Gm42706-201ENSMUST00000199733 1910 ntBASIC15.1■□□□□ 0.01
Smc5Q8CG46 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smc5Q8CG46 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Smc5Q8CG46 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smc5Q8CG46 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC15.1■□□□□ 0.01
Smc5Q8CG46 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Smc5Q8CG46 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Smc5Q8CG46 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC15.1■□□□□ 0.01
Smc5Q8CG46 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC15.1■□□□□ 0.01
Smc5Q8CG46 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smc5Q8CG46 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smc5Q8CG46 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Smc5Q8CG46 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC15.1■□□□□ 0.01
Smc5Q8CG46 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smc5Q8CG46 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Smc5Q8CG46 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smc5Q8CG46 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC15.1■□□□□ 0.01
Smc5Q8CG46 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smc5Q8CG46 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC15.1■□□□□ 0.01
Smc5Q8CG46 AC154671.1-201ENSMUST00000228617 1578 ntBASIC15.1■□□□□ 0.01
Smc5Q8CG46 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Smc5Q8CG46 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Smc5Q8CG46 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Smc5Q8CG46 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Smc5Q8CG46 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Smc5Q8CG46 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smc5Q8CG46 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smc5Q8CG46 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smc5Q8CG46 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smc5Q8CG46 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smc5Q8CG46 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Smc5Q8CG46 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smc5Q8CG46 Gm29100-201ENSMUST00000187564 4410 ntBASIC15.09■□□□□ 0.01
Smc5Q8CG46 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smc5Q8CG46 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smc5Q8CG46 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Smc5Q8CG46 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC15.09■□□□□ 0.01
Smc5Q8CG46 Gm13316-201ENSMUST00000140537 691 ntBASIC15.09■□□□□ 0.01
Smc5Q8CG46 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smc5Q8CG46 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC15.09■□□□□ 0.01
Smc5Q8CG46 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Smc5Q8CG46 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smc5Q8CG46 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smc5Q8CG46 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smc5Q8CG46 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC15.09■□□□□ 0.01
Smc5Q8CG46 Gm42693-201ENSMUST00000196779 631 ntBASIC15.09■□□□□ 0.01
Smc5Q8CG46 Gm40466-201ENSMUST00000212174 422 ntBASIC15.09■□□□□ 0.01
Smc5Q8CG46 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms