Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc87Q8CDL9 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc87Q8CDL9 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc87Q8CDL9 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc87Q8CDL9 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc87Q8CDL9 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ccdc87Q8CDL9 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Ccdc87Q8CDL9 Gm7029-201ENSMUST00000173226 450 ntBASIC13.01□□□□□ -0.33
Ccdc87Q8CDL9 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.01□□□□□ -0.33
Ccdc87Q8CDL9 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.01□□□□□ -0.33
Ccdc87Q8CDL9 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc87Q8CDL9 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc87Q8CDL9 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc87Q8CDL9 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.01□□□□□ -0.33
Ccdc87Q8CDL9 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.01□□□□□ -0.33
Ccdc87Q8CDL9 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Ccdc87Q8CDL9 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ccdc87Q8CDL9 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc87Q8CDL9 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc87Q8CDL9 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ccdc87Q8CDL9 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.01□□□□□ -0.33
Ccdc87Q8CDL9 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc87Q8CDL9 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ccdc87Q8CDL9 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc87Q8CDL9 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc87Q8CDL9 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc87Q8CDL9 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc87Q8CDL9 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc87Q8CDL9 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc87Q8CDL9 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc87Q8CDL9 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc87Q8CDL9 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ccdc87Q8CDL9 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc87Q8CDL9 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc87Q8CDL9 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc87Q8CDL9 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Gm5620-201ENSMUST00000077991 1348 ntBASIC13□□□□□ -0.33
Ccdc87Q8CDL9 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Gm27514-201ENSMUST00000183692 110 ntBASIC13□□□□□ -0.33
Ccdc87Q8CDL9 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Gm10478-201ENSMUST00000084451 396 ntBASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc87Q8CDL9 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc87Q8CDL9 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc87Q8CDL9 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc87Q8CDL9 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ccdc87Q8CDL9 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc87Q8CDL9 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc87Q8CDL9 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc87Q8CDL9 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Ccdc87Q8CDL9 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
Ccdc87Q8CDL9 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.99□□□□□ -0.33
Ccdc87Q8CDL9 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc87Q8CDL9 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc87Q8CDL9 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms