Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vps53Q8CCB4 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps53Q8CCB4 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vps53Q8CCB4 Gm38273-201ENSMUST00000194987 2382 ntBASIC14.3□□□□□ -0.12
Vps53Q8CCB4 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps53Q8CCB4 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps53Q8CCB4 Gm14130-201ENSMUST00000118417 987 ntBASIC14.3□□□□□ -0.12
Vps53Q8CCB4 Gm11439-201ENSMUST00000118598 409 ntBASIC14.3□□□□□ -0.12
Vps53Q8CCB4 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
Vps53Q8CCB4 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC14.3□□□□□ -0.12
Vps53Q8CCB4 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vps53Q8CCB4 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vps53Q8CCB4 Gm37986-201ENSMUST00000193285 383 ntBASIC14.3□□□□□ -0.12
Vps53Q8CCB4 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC14.3□□□□□ -0.12
Vps53Q8CCB4 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC14.3□□□□□ -0.12
Vps53Q8CCB4 Abhd11os-203ENSMUST00000222613 363 ntBASIC14.3□□□□□ -0.12
Vps53Q8CCB4 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps53Q8CCB4 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC14.3□□□□□ -0.12
Vps53Q8CCB4 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vps53Q8CCB4 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps53Q8CCB4 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vps53Q8CCB4 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps53Q8CCB4 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vps53Q8CCB4 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
Vps53Q8CCB4 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps53Q8CCB4 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps53Q8CCB4 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps53Q8CCB4 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vps53Q8CCB4 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.3□□□□□ -0.12
Vps53Q8CCB4 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC14.3□□□□□ -0.12
Vps53Q8CCB4 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Vps53Q8CCB4 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps53Q8CCB4 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps53Q8CCB4 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps53Q8CCB4 Gm5780-201ENSMUST00000217774 1834 ntBASIC14.29□□□□□ -0.12
Vps53Q8CCB4 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps53Q8CCB4 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Vps53Q8CCB4 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.29□□□□□ -0.12
Vps53Q8CCB4 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps53Q8CCB4 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps53Q8CCB4 Gm42706-201ENSMUST00000199733 1910 ntBASIC14.29□□□□□ -0.12
Vps53Q8CCB4 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps53Q8CCB4 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps53Q8CCB4 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps53Q8CCB4 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps53Q8CCB4 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vps53Q8CCB4 Gm23270-201ENSMUST00000104055 131 ntBASIC14.29□□□□□ -0.12
Vps53Q8CCB4 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Vps53Q8CCB4 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vps53Q8CCB4 Gm14277-201ENSMUST00000121195 360 ntBASIC14.29□□□□□ -0.12
Vps53Q8CCB4 Gm13394-201ENSMUST00000121658 1000 ntBASIC14.29□□□□□ -0.12
Vps53Q8CCB4 Gm14760-201ENSMUST00000121831 999 ntBASIC14.29□□□□□ -0.12
Vps53Q8CCB4 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps53Q8CCB4 Mir5120-201ENSMUST00000175020 78 ntBASIC14.29□□□□□ -0.12
Vps53Q8CCB4 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC14.29□□□□□ -0.12
Vps53Q8CCB4 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vps53Q8CCB4 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC14.29□□□□□ -0.12
Vps53Q8CCB4 Mir6979-201ENSMUST00000183927 56 ntBASIC14.29□□□□□ -0.12
Vps53Q8CCB4 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC14.29□□□□□ -0.12
Vps53Q8CCB4 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC14.29□□□□□ -0.12
Vps53Q8CCB4 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC14.29□□□□□ -0.12
Vps53Q8CCB4 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vps53Q8CCB4 Gm5904-201ENSMUST00000210286 865 ntBASIC14.29□□□□□ -0.12
Vps53Q8CCB4 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps53Q8CCB4 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps53Q8CCB4 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps53Q8CCB4 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps53Q8CCB4 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps53Q8CCB4 Gm4735-201ENSMUST00000138679 1302 ntBASIC14.29□□□□□ -0.12
Vps53Q8CCB4 Gm5855-201ENSMUST00000200240 1305 ntBASIC14.29□□□□□ -0.12
Vps53Q8CCB4 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps53Q8CCB4 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vps53Q8CCB4 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Vps53Q8CCB4 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Vps53Q8CCB4 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Vps53Q8CCB4 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Vps53Q8CCB4 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps53Q8CCB4 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vps53Q8CCB4 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Vps53Q8CCB4 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps53Q8CCB4 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps53Q8CCB4 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps53Q8CCB4 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps53Q8CCB4 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps53Q8CCB4 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vps53Q8CCB4 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vps53Q8CCB4 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps53Q8CCB4 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vps53Q8CCB4 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps53Q8CCB4 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps53Q8CCB4 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps53Q8CCB4 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps53Q8CCB4 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Vps53Q8CCB4 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps53Q8CCB4 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps53Q8CCB4 Gm14028-201ENSMUST00000117434 479 ntBASIC14.28□□□□□ -0.12
Vps53Q8CCB4 Gm12176-201ENSMUST00000121420 875 ntBASIC14.28□□□□□ -0.12
Vps53Q8CCB4 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC14.28□□□□□ -0.12
Vps53Q8CCB4 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps53Q8CCB4 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms