Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trub1Q8C0D0 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trub1Q8C0D0 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.63□□□□□ -0.39
Trub1Q8C0D0 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trub1Q8C0D0 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Trub1Q8C0D0 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trub1Q8C0D0 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.63□□□□□ -0.39
Trub1Q8C0D0 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Trub1Q8C0D0 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trub1Q8C0D0 Gm26956-201ENSMUST00000182176 986 ntBASIC12.63□□□□□ -0.39
Trub1Q8C0D0 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.63□□□□□ -0.39
Trub1Q8C0D0 Gm30285-201ENSMUST00000214614 422 ntBASIC12.63□□□□□ -0.39
Trub1Q8C0D0 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trub1Q8C0D0 Gm7399-201ENSMUST00000032395 858 ntBASIC12.63□□□□□ -0.39
Trub1Q8C0D0 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trub1Q8C0D0 Gm9996-201ENSMUST00000070359 913 ntBASIC12.63□□□□□ -0.39
Trub1Q8C0D0 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trub1Q8C0D0 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trub1Q8C0D0 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trub1Q8C0D0 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.63□□□□□ -0.39
Trub1Q8C0D0 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trub1Q8C0D0 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trub1Q8C0D0 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trub1Q8C0D0 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trub1Q8C0D0 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trub1Q8C0D0 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trub1Q8C0D0 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trub1Q8C0D0 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trub1Q8C0D0 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trub1Q8C0D0 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trub1Q8C0D0 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trub1Q8C0D0 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trub1Q8C0D0 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.62□□□□□ -0.39
Trub1Q8C0D0 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trub1Q8C0D0 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trub1Q8C0D0 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trub1Q8C0D0 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.62□□□□□ -0.39
Trub1Q8C0D0 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trub1Q8C0D0 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trub1Q8C0D0 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trub1Q8C0D0 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trub1Q8C0D0 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trub1Q8C0D0 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trub1Q8C0D0 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trub1Q8C0D0 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.62□□□□□ -0.39
Trub1Q8C0D0 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trub1Q8C0D0 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.62□□□□□ -0.39
Trub1Q8C0D0 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trub1Q8C0D0 Rprl1-201ENSMUST00000158050 327 ntBASIC12.62□□□□□ -0.39
Trub1Q8C0D0 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.62□□□□□ -0.39
Trub1Q8C0D0 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trub1Q8C0D0 Gm6621-201ENSMUST00000193251 772 ntBASIC12.62□□□□□ -0.39
Trub1Q8C0D0 Gm35960-201ENSMUST00000202712 767 ntBASIC12.62□□□□□ -0.39
Trub1Q8C0D0 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trub1Q8C0D0 Gm19994-201ENSMUST00000217086 586 ntBASIC12.62□□□□□ -0.39
Trub1Q8C0D0 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trub1Q8C0D0 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.62□□□□□ -0.39
Trub1Q8C0D0 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trub1Q8C0D0 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trub1Q8C0D0 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trub1Q8C0D0 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trub1Q8C0D0 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trub1Q8C0D0 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trub1Q8C0D0 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trub1Q8C0D0 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trub1Q8C0D0 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trub1Q8C0D0 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trub1Q8C0D0 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trub1Q8C0D0 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trub1Q8C0D0 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.62□□□□□ -0.39
Trub1Q8C0D0 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trub1Q8C0D0 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.62□□□□□ -0.39
Trub1Q8C0D0 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trub1Q8C0D0 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trub1Q8C0D0 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trub1Q8C0D0 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trub1Q8C0D0 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trub1Q8C0D0 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trub1Q8C0D0 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trub1Q8C0D0 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms