Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC13.02□□□□□ -0.32
Trerf1Q8BXJ2 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trerf1Q8BXJ2 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trerf1Q8BXJ2 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trerf1Q8BXJ2 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.02□□□□□ -0.33
Trerf1Q8BXJ2 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.02□□□□□ -0.33
Trerf1Q8BXJ2 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.02□□□□□ -0.33
Trerf1Q8BXJ2 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.02□□□□□ -0.33
Trerf1Q8BXJ2 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trerf1Q8BXJ2 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.02□□□□□ -0.33
Trerf1Q8BXJ2 Gm7809-201ENSMUST00000153199 742 ntBASIC13.02□□□□□ -0.33
Trerf1Q8BXJ2 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trerf1Q8BXJ2 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.02□□□□□ -0.33
Trerf1Q8BXJ2 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trerf1Q8BXJ2 Gm43133-201ENSMUST00000197472 463 ntBASIC13.02□□□□□ -0.33
Trerf1Q8BXJ2 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trerf1Q8BXJ2 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.02□□□□□ -0.33
Trerf1Q8BXJ2 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trerf1Q8BXJ2 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trerf1Q8BXJ2 Gm9823-201ENSMUST00000051212 327 ntBASIC13.02□□□□□ -0.33
Trerf1Q8BXJ2 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trerf1Q8BXJ2 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trerf1Q8BXJ2 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.02□□□□□ -0.33
Trerf1Q8BXJ2 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trerf1Q8BXJ2 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trerf1Q8BXJ2 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trerf1Q8BXJ2 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.02□□□□□ -0.33
Trerf1Q8BXJ2 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC13.02□□□□□ -0.33
Trerf1Q8BXJ2 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC13.02□□□□□ -0.33
Trerf1Q8BXJ2 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trerf1Q8BXJ2 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trerf1Q8BXJ2 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.02□□□□□ -0.33
Trerf1Q8BXJ2 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trerf1Q8BXJ2 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.01□□□□□ -0.33
Trerf1Q8BXJ2 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trerf1Q8BXJ2 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trerf1Q8BXJ2 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trerf1Q8BXJ2 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trerf1Q8BXJ2 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trerf1Q8BXJ2 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trerf1Q8BXJ2 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trerf1Q8BXJ2 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trerf1Q8BXJ2 Gm12502-201ENSMUST00000120197 444 ntBASIC13.01□□□□□ -0.33
Trerf1Q8BXJ2 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trerf1Q8BXJ2 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.01□□□□□ -0.33
Trerf1Q8BXJ2 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.01□□□□□ -0.33
Trerf1Q8BXJ2 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.01□□□□□ -0.33
Trerf1Q8BXJ2 Gm43118-201ENSMUST00000199149 775 ntBASIC13.01□□□□□ -0.33
Trerf1Q8BXJ2 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trerf1Q8BXJ2 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trerf1Q8BXJ2 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.01□□□□□ -0.33
Trerf1Q8BXJ2 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.01□□□□□ -0.33
Trerf1Q8BXJ2 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.01□□□□□ -0.33
Trerf1Q8BXJ2 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trerf1Q8BXJ2 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.01□□□□□ -0.33
Trerf1Q8BXJ2 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trerf1Q8BXJ2 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trerf1Q8BXJ2 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trerf1Q8BXJ2 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trerf1Q8BXJ2 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trerf1Q8BXJ2 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trerf1Q8BXJ2 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trerf1Q8BXJ2 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trerf1Q8BXJ2 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trerf1Q8BXJ2 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trerf1Q8BXJ2 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Trerf1Q8BXJ2 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trerf1Q8BXJ2 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trerf1Q8BXJ2 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trerf1Q8BXJ2 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trerf1Q8BXJ2 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trerf1Q8BXJ2 Gm3052-202ENSMUST00000188254 2224 ntBASIC13□□□□□ -0.33
Trerf1Q8BXJ2 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trerf1Q8BXJ2 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trerf1Q8BXJ2 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trerf1Q8BXJ2 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trerf1Q8BXJ2 Gm6992-201ENSMUST00000217973 1607 ntBASIC13□□□□□ -0.33
Trerf1Q8BXJ2 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trerf1Q8BXJ2 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Trerf1Q8BXJ2 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13□□□□□ -0.33
Trerf1Q8BXJ2 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Trerf1Q8BXJ2 Gm42627-201ENSMUST00000197347 224 ntBASIC13□□□□□ -0.33
Trerf1Q8BXJ2 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trerf1Q8BXJ2 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13□□□□□ -0.33
Trerf1Q8BXJ2 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trerf1Q8BXJ2 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trerf1Q8BXJ2 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13□□□□□ -0.33
Trerf1Q8BXJ2 Gm36987-201ENSMUST00000194704 2979 ntBASIC13□□□□□ -0.33
Trerf1Q8BXJ2 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trerf1Q8BXJ2 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13□□□□□ -0.33
Trerf1Q8BXJ2 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trerf1Q8BXJ2 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13□□□□□ -0.33
Trerf1Q8BXJ2 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trerf1Q8BXJ2 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trerf1Q8BXJ2 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trerf1Q8BXJ2 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trerf1Q8BXJ2 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trerf1Q8BXJ2 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trerf1Q8BXJ2 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trerf1Q8BXJ2 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms