Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ubr7Q8BU04 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.37□□□□□ -0.43
Ubr7Q8BU04 Gm24514-201ENSMUST00000174961 285 ntBASIC12.37□□□□□ -0.43
Ubr7Q8BU04 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ubr7Q8BU04 Mir6979-201ENSMUST00000183927 56 ntBASIC12.37□□□□□ -0.43
Ubr7Q8BU04 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ubr7Q8BU04 Gm42997-202ENSMUST00000200321 985 ntBASIC12.37□□□□□ -0.43
Ubr7Q8BU04 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ubr7Q8BU04 Gm18730-201ENSMUST00000218038 343 ntBASIC12.37□□□□□ -0.43
Ubr7Q8BU04 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ubr7Q8BU04 Gm270-201ENSMUST00000223010 976 ntBASIC12.37□□□□□ -0.43
Ubr7Q8BU04 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ubr7Q8BU04 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ubr7Q8BU04 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ubr7Q8BU04 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ubr7Q8BU04 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.37□□□□□ -0.43
Ubr7Q8BU04 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ubr7Q8BU04 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ubr7Q8BU04 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ubr7Q8BU04 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ubr7Q8BU04 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Ubr7Q8BU04 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ubr7Q8BU04 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.37□□□□□ -0.43
Ubr7Q8BU04 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ubr7Q8BU04 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ubr7Q8BU04 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ubr7Q8BU04 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.37□□□□□ -0.43
Ubr7Q8BU04 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.37□□□□□ -0.43
Ubr7Q8BU04 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubr7Q8BU04 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubr7Q8BU04 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubr7Q8BU04 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubr7Q8BU04 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubr7Q8BU04 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ubr7Q8BU04 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubr7Q8BU04 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubr7Q8BU04 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubr7Q8BU04 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubr7Q8BU04 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubr7Q8BU04 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.36□□□□□ -0.43
Ubr7Q8BU04 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubr7Q8BU04 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubr7Q8BU04 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ubr7Q8BU04 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubr7Q8BU04 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC12.36□□□□□ -0.43
Ubr7Q8BU04 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC12.36□□□□□ -0.43
Ubr7Q8BU04 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.36□□□□□ -0.43
Ubr7Q8BU04 Gm11511-201ENSMUST00000118146 540 ntBASIC12.36□□□□□ -0.43
Ubr7Q8BU04 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.36□□□□□ -0.43
Ubr7Q8BU04 Gm12266-201ENSMUST00000120311 962 ntBASIC12.36□□□□□ -0.43
Ubr7Q8BU04 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.36□□□□□ -0.43
Ubr7Q8BU04 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.36□□□□□ -0.43
Ubr7Q8BU04 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.36□□□□□ -0.43
Ubr7Q8BU04 Gm28071-201ENSMUST00000190355 478 ntBASIC12.36□□□□□ -0.43
Ubr7Q8BU04 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ubr7Q8BU04 Gm17827-201ENSMUST00000211825 742 ntBASIC12.36□□□□□ -0.43
Ubr7Q8BU04 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.36□□□□□ -0.43
Ubr7Q8BU04 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC12.36□□□□□ -0.43
Ubr7Q8BU04 Gm29787-201ENSMUST00000222129 849 ntBASIC12.36□□□□□ -0.43
Ubr7Q8BU04 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.36□□□□□ -0.43
Ubr7Q8BU04 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubr7Q8BU04 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ubr7Q8BU04 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubr7Q8BU04 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ubr7Q8BU04 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ubr7Q8BU04 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.36□□□□□ -0.43
Ubr7Q8BU04 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubr7Q8BU04 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubr7Q8BU04 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.36□□□□□ -0.43
Ubr7Q8BU04 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.36□□□□□ -0.43
Ubr7Q8BU04 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubr7Q8BU04 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubr7Q8BU04 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ubr7Q8BU04 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubr7Q8BU04 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ubr7Q8BU04 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubr7Q8BU04 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Ubr7Q8BU04 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubr7Q8BU04 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.35□□□□□ -0.43
Ubr7Q8BU04 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubr7Q8BU04 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubr7Q8BU04 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubr7Q8BU04 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubr7Q8BU04 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ubr7Q8BU04 Gm5419-201ENSMUST00000119301 527 ntBASIC12.35□□□□□ -0.43
Ubr7Q8BU04 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ubr7Q8BU04 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.35□□□□□ -0.43
Ubr7Q8BU04 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.35□□□□□ -0.43
Ubr7Q8BU04 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.35□□□□□ -0.43
Ubr7Q8BU04 Gm18038-201ENSMUST00000197900 485 ntBASIC12.35□□□□□ -0.43
Ubr7Q8BU04 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubr7Q8BU04 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubr7Q8BU04 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubr7Q8BU04 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.35□□□□□ -0.43
Ubr7Q8BU04 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ubr7Q8BU04 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubr7Q8BU04 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Ubr7Q8BU04 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ubr7Q8BU04 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubr7Q8BU04 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms