Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC13.34□□□□□ -0.27
Depdc1bQ8BH88 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Depdc1bQ8BH88 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Depdc1bQ8BH88 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Depdc1bQ8BH88 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Depdc1bQ8BH88 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Depdc1bQ8BH88 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Depdc1bQ8BH88 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Depdc1bQ8BH88 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Depdc1bQ8BH88 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.33□□□□□ -0.28
Depdc1bQ8BH88 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Depdc1bQ8BH88 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Depdc1bQ8BH88 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Depdc1bQ8BH88 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Depdc1bQ8BH88 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Depdc1bQ8BH88 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.33□□□□□ -0.28
Depdc1bQ8BH88 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Depdc1bQ8BH88 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.33□□□□□ -0.28
Depdc1bQ8BH88 Gm13315-201ENSMUST00000120376 991 ntBASIC13.33□□□□□ -0.28
Depdc1bQ8BH88 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.33□□□□□ -0.28
Depdc1bQ8BH88 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Depdc1bQ8BH88 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Depdc1bQ8BH88 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Depdc1bQ8BH88 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Depdc1bQ8BH88 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Depdc1bQ8BH88 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Depdc1bQ8BH88 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.33□□□□□ -0.28
Depdc1bQ8BH88 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.33□□□□□ -0.28
Depdc1bQ8BH88 Gm45925-201ENSMUST00000218882 744 ntBASIC13.33□□□□□ -0.28
Depdc1bQ8BH88 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.33□□□□□ -0.28
Depdc1bQ8BH88 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Depdc1bQ8BH88 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Depdc1bQ8BH88 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Depdc1bQ8BH88 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Depdc1bQ8BH88 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC13.33□□□□□ -0.28
Depdc1bQ8BH88 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Depdc1bQ8BH88 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Depdc1bQ8BH88 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Depdc1bQ8BH88 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Depdc1bQ8BH88 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Depdc1bQ8BH88 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Depdc1bQ8BH88 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Depdc1bQ8BH88 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Depdc1bQ8BH88 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Depdc1bQ8BH88 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Depdc1bQ8BH88 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Depdc1bQ8BH88 Gm7993-201ENSMUST00000200970 1384 ntBASIC13.32□□□□□ -0.28
Depdc1bQ8BH88 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.32□□□□□ -0.28
Depdc1bQ8BH88 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Depdc1bQ8BH88 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Depdc1bQ8BH88 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Depdc1bQ8BH88 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Depdc1bQ8BH88 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Depdc1bQ8BH88 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Depdc1bQ8BH88 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Depdc1bQ8BH88 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Depdc1bQ8BH88 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Depdc1bQ8BH88 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Depdc1bQ8BH88 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Depdc1bQ8BH88 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Depdc1bQ8BH88 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Depdc1bQ8BH88 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Depdc1bQ8BH88 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Depdc1bQ8BH88 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Depdc1bQ8BH88 Gm14726-201ENSMUST00000120623 896 ntBASIC13.32□□□□□ -0.28
Depdc1bQ8BH88 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.32□□□□□ -0.28
Depdc1bQ8BH88 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.32□□□□□ -0.28
Depdc1bQ8BH88 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Depdc1bQ8BH88 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC13.32□□□□□ -0.28
Depdc1bQ8BH88 Gm44405-201ENSMUST00000198952 126 ntBASIC13.32□□□□□ -0.28
Depdc1bQ8BH88 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.32□□□□□ -0.28
Depdc1bQ8BH88 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Depdc1bQ8BH88 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Depdc1bQ8BH88 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.32□□□□□ -0.28
Depdc1bQ8BH88 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Depdc1bQ8BH88 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Depdc1bQ8BH88 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Depdc1bQ8BH88 Gm24136-201ENSMUST00000083374 165 ntBASIC13.32□□□□□ -0.28
Depdc1bQ8BH88 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Depdc1bQ8BH88 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Depdc1bQ8BH88 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Depdc1bQ8BH88 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Depdc1bQ8BH88 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.32□□□□□ -0.28
Depdc1bQ8BH88 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC13.32□□□□□ -0.28
Depdc1bQ8BH88 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Depdc1bQ8BH88 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Depdc1bQ8BH88 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC13.32□□□□□ -0.28
Depdc1bQ8BH88 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Depdc1bQ8BH88 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Depdc1bQ8BH88 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Depdc1bQ8BH88 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Depdc1bQ8BH88 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Depdc1bQ8BH88 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Depdc1bQ8BH88 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC13.31□□□□□ -0.28
Depdc1bQ8BH88 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.31□□□□□ -0.28
Depdc1bQ8BH88 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Depdc1bQ8BH88 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Depdc1bQ8BH88 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Depdc1bQ8BH88 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Depdc1bQ8BH88 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms