Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smndc1Q8BGT7 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Smndc1Q8BGT7 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Smndc1Q8BGT7 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smndc1Q8BGT7 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smndc1Q8BGT7 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smndc1Q8BGT7 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Smndc1Q8BGT7 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smndc1Q8BGT7 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Smndc1Q8BGT7 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Smndc1Q8BGT7 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smndc1Q8BGT7 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.96□□□□□ -0.49
Smndc1Q8BGT7 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.96□□□□□ -0.49
Smndc1Q8BGT7 Gm2495-201ENSMUST00000191160 466 ntBASIC11.96□□□□□ -0.49
Smndc1Q8BGT7 Gm38671-201ENSMUST00000200573 130 ntBASIC11.96□□□□□ -0.49
Smndc1Q8BGT7 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.96□□□□□ -0.49
Smndc1Q8BGT7 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.96□□□□□ -0.49
Smndc1Q8BGT7 Gm6983-201ENSMUST00000214912 628 ntBASIC11.96□□□□□ -0.49
Smndc1Q8BGT7 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.96□□□□□ -0.49
Smndc1Q8BGT7 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.96□□□□□ -0.49
Smndc1Q8BGT7 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smndc1Q8BGT7 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smndc1Q8BGT7 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Smndc1Q8BGT7 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smndc1Q8BGT7 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smndc1Q8BGT7 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smndc1Q8BGT7 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Smndc1Q8BGT7 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
Smndc1Q8BGT7 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Smndc1Q8BGT7 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Smndc1Q8BGT7 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Smndc1Q8BGT7 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Smndc1Q8BGT7 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Smndc1Q8BGT7 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Smndc1Q8BGT7 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.96□□□□□ -0.5
Smndc1Q8BGT7 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Smndc1Q8BGT7 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smndc1Q8BGT7 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smndc1Q8BGT7 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Smndc1Q8BGT7 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.95□□□□□ -0.5
Smndc1Q8BGT7 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.95□□□□□ -0.5
Smndc1Q8BGT7 Gm45828-201ENSMUST00000206938 1836 ntBASIC11.95□□□□□ -0.5
Smndc1Q8BGT7 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.95□□□□□ -0.5
Smndc1Q8BGT7 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smndc1Q8BGT7 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smndc1Q8BGT7 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smndc1Q8BGT7 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smndc1Q8BGT7 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Smndc1Q8BGT7 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smndc1Q8BGT7 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Smndc1Q8BGT7 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smndc1Q8BGT7 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.95□□□□□ -0.5
Smndc1Q8BGT7 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smndc1Q8BGT7 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smndc1Q8BGT7 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.95□□□□□ -0.5
Smndc1Q8BGT7 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Smndc1Q8BGT7 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.95□□□□□ -0.5
Smndc1Q8BGT7 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smndc1Q8BGT7 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smndc1Q8BGT7 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smndc1Q8BGT7 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smndc1Q8BGT7 Gm11425-201ENSMUST00000119608 498 ntBASIC11.95□□□□□ -0.5
Smndc1Q8BGT7 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smndc1Q8BGT7 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.95□□□□□ -0.5
Smndc1Q8BGT7 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.95□□□□□ -0.5
Smndc1Q8BGT7 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.95□□□□□ -0.5
Smndc1Q8BGT7 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.95□□□□□ -0.5
Smndc1Q8BGT7 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Smndc1Q8BGT7 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Smndc1Q8BGT7 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Smndc1Q8BGT7 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smndc1Q8BGT7 Gm9396-201ENSMUST00000076703 567 ntBASIC11.95□□□□□ -0.5
Smndc1Q8BGT7 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smndc1Q8BGT7 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Smndc1Q8BGT7 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smndc1Q8BGT7 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Smndc1Q8BGT7 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Smndc1Q8BGT7 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smndc1Q8BGT7 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smndc1Q8BGT7 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Smndc1Q8BGT7 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Smndc1Q8BGT7 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smndc1Q8BGT7 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smndc1Q8BGT7 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Smndc1Q8BGT7 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.94□□□□□ -0.5
Smndc1Q8BGT7 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smndc1Q8BGT7 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smndc1Q8BGT7 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Smndc1Q8BGT7 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smndc1Q8BGT7 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smndc1Q8BGT7 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC11.94□□□□□ -0.5
Smndc1Q8BGT7 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smndc1Q8BGT7 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.94□□□□□ -0.5
Smndc1Q8BGT7 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smndc1Q8BGT7 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smndc1Q8BGT7 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Smndc1Q8BGT7 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.94□□□□□ -0.5
Smndc1Q8BGT7 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.94□□□□□ -0.5
Smndc1Q8BGT7 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smndc1Q8BGT7 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms