Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Gm15198-201ENSMUST00000117283 177 ntBASIC11.95□□□□□ -0.5
Trim50Q810I2 Gm12241-201ENSMUST00000118330 726 ntBASIC11.95□□□□□ -0.5
Trim50Q810I2 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim50Q810I2 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.95□□□□□ -0.5
Trim50Q810I2 Gm24845-201ENSMUST00000158034 109 ntBASIC11.95□□□□□ -0.5
Trim50Q810I2 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim50Q810I2 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.95□□□□□ -0.5
Trim50Q810I2 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.95□□□□□ -0.5
Trim50Q810I2 Gm6621-201ENSMUST00000193251 772 ntBASIC11.95□□□□□ -0.5
Trim50Q810I2 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.95□□□□□ -0.5
Trim50Q810I2 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.95□□□□□ -0.5
Trim50Q810I2 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.95□□□□□ -0.5
Trim50Q810I2 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.95□□□□□ -0.5
Trim50Q810I2 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.95□□□□□ -0.5
Trim50Q810I2 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim50Q810I2 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trim50Q810I2 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.95□□□□□ -0.5
Trim50Q810I2 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.95□□□□□ -0.5
Trim50Q810I2 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim50Q810I2 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trim50Q810I2 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trim50Q810I2 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim50Q810I2 Pck2-205ENSMUST00000226352 2784 ntBASIC11.95□□□□□ -0.5
Trim50Q810I2 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim50Q810I2 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim50Q810I2 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim50Q810I2 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim50Q810I2 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim50Q810I2 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.94□□□□□ -0.5
Trim50Q810I2 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.94□□□□□ -0.5
Trim50Q810I2 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.94□□□□□ -0.5
Trim50Q810I2 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim50Q810I2 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim50Q810I2 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.94□□□□□ -0.5
Trim50Q810I2 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.94□□□□□ -0.5
Trim50Q810I2 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim50Q810I2 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Trim50Q810I2 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim50Q810I2 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim50Q810I2 Gm14832-201ENSMUST00000121289 322 ntBASIC11.94□□□□□ -0.5
Trim50Q810I2 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim50Q810I2 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.94□□□□□ -0.5
Trim50Q810I2 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trim50Q810I2 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Trim50Q810I2 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trim50Q810I2 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.94□□□□□ -0.5
Trim50Q810I2 Gm28882-201ENSMUST00000185504 314 ntBASIC11.94□□□□□ -0.5
Trim50Q810I2 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.94□□□□□ -0.5
Trim50Q810I2 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.94□□□□□ -0.5
Trim50Q810I2 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim50Q810I2 Gm6334-201ENSMUST00000207083 228 ntBASIC11.94□□□□□ -0.5
Trim50Q810I2 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim50Q810I2 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Trim50Q810I2 Gm9368-201ENSMUST00000219348 831 ntBASIC11.94□□□□□ -0.5
Trim50Q810I2 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim50Q810I2 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim50Q810I2 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim50Q810I2 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Trim50Q810I2 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim50Q810I2 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trim50Q810I2 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.94□□□□□ -0.5
Trim50Q810I2 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Trim50Q810I2 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim50Q810I2 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim50Q810I2 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim50Q810I2 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim50Q810I2 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Trim50Q810I2 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.94□□□□□ -0.5
Trim50Q810I2 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trim50Q810I2 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim50Q810I2 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim50Q810I2 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim50Q810I2 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trim50Q810I2 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim50Q810I2 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim50Q810I2 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.93□□□□□ -0.5
Trim50Q810I2 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.93□□□□□ -0.5
Trim50Q810I2 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim50Q810I2 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim50Q810I2 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim50Q810I2 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trim50Q810I2 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim50Q810I2 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.93□□□□□ -0.5
Trim50Q810I2 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim50Q810I2 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim50Q810I2 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Trim50Q810I2 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim50Q810I2 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.93□□□□□ -0.5
Trim50Q810I2 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.93□□□□□ -0.5
Trim50Q810I2 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trim50Q810I2 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim50Q810I2 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.93□□□□□ -0.5
Trim50Q810I2 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Trim50Q810I2 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.93□□□□□ -0.5
Trim50Q810I2 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim50Q810I2 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.93□□□□□ -0.5
Trim50Q810I2 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.93□□□□□ -0.5
Trim50Q810I2 Gm2991-201ENSMUST00000173338 480 ntBASIC11.93□□□□□ -0.5
Trim50Q810I2 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.93□□□□□ -0.5
Trim50Q810I2 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms