Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim36Q80WG7 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim36Q80WG7 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim36Q80WG7 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim36Q80WG7 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trim36Q80WG7 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim36Q80WG7 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim36Q80WG7 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.87□□□□□ -0.51
Trim36Q80WG7 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim36Q80WG7 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trim36Q80WG7 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim36Q80WG7 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim36Q80WG7 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trim36Q80WG7 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim36Q80WG7 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim36Q80WG7 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trim36Q80WG7 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim36Q80WG7 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim36Q80WG7 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim36Q80WG7 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim36Q80WG7 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Trim36Q80WG7 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trim36Q80WG7 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim36Q80WG7 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.86□□□□□ -0.51
Trim36Q80WG7 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.86□□□□□ -0.51
Trim36Q80WG7 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.86□□□□□ -0.51
Trim36Q80WG7 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim36Q80WG7 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.86□□□□□ -0.51
Trim36Q80WG7 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim36Q80WG7 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.86□□□□□ -0.51
Trim36Q80WG7 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim36Q80WG7 Gm6222-202ENSMUST00000182143 629 ntBASIC11.86□□□□□ -0.51
Trim36Q80WG7 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.86□□□□□ -0.51
Trim36Q80WG7 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.86□□□□□ -0.51
Trim36Q80WG7 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Trim36Q80WG7 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim36Q80WG7 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.86□□□□□ -0.51
Trim36Q80WG7 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim36Q80WG7 Rassf8-202ENSMUST00000058538 1131 ntBASIC11.86□□□□□ -0.51
Trim36Q80WG7 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trim36Q80WG7 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.86□□□□□ -0.51
Trim36Q80WG7 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim36Q80WG7 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim36Q80WG7 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim36Q80WG7 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim36Q80WG7 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.86□□□□□ -0.51
Trim36Q80WG7 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.86□□□□□ -0.51
Trim36Q80WG7 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.86□□□□□ -0.51
Trim36Q80WG7 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim36Q80WG7 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim36Q80WG7 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim36Q80WG7 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim36Q80WG7 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Trim36Q80WG7 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim36Q80WG7 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim36Q80WG7 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim36Q80WG7 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.86□□□□□ -0.51
Trim36Q80WG7 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trim36Q80WG7 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trim36Q80WG7 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim36Q80WG7 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim36Q80WG7 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.85□□□□□ -0.51
Trim36Q80WG7 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim36Q80WG7 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim36Q80WG7 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim36Q80WG7 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim36Q80WG7 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim36Q80WG7 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim36Q80WG7 Gm14723-201ENSMUST00000118686 215 ntBASIC11.85□□□□□ -0.51
Trim36Q80WG7 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim36Q80WG7 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim36Q80WG7 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim36Q80WG7 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.85□□□□□ -0.51
Trim36Q80WG7 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.85□□□□□ -0.51
Trim36Q80WG7 Gm43133-201ENSMUST00000197472 463 ntBASIC11.85□□□□□ -0.51
Trim36Q80WG7 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.85□□□□□ -0.51
Trim36Q80WG7 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim36Q80WG7 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.85□□□□□ -0.51
Trim36Q80WG7 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.85□□□□□ -0.51
Trim36Q80WG7 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.85□□□□□ -0.51
Trim36Q80WG7 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim36Q80WG7 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trim36Q80WG7 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.85□□□□□ -0.51
Trim36Q80WG7 Mir339-201ENSMUST00000083659 96 ntBASIC11.85□□□□□ -0.51
Trim36Q80WG7 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim36Q80WG7 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim36Q80WG7 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim36Q80WG7 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.85□□□□□ -0.51
Trim36Q80WG7 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim36Q80WG7 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim36Q80WG7 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim36Q80WG7 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim36Q80WG7 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim36Q80WG7 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim36Q80WG7 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim36Q80WG7 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim36Q80WG7 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim36Q80WG7 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim36Q80WG7 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trim36Q80WG7 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms