Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.08□□□□□ -0.48
Pcdh19Q80TF3 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.08□□□□□ -0.48
Pcdh19Q80TF3 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.08□□□□□ -0.48
Pcdh19Q80TF3 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh19Q80TF3 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh19Q80TF3 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh19Q80TF3 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Pcdh19Q80TF3 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh19Q80TF3 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Pcdh19Q80TF3 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Pcdh19Q80TF3 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Pcdh19Q80TF3 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh19Q80TF3 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh19Q80TF3 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh19Q80TF3 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.07□□□□□ -0.48
Pcdh19Q80TF3 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh19Q80TF3 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh19Q80TF3 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh19Q80TF3 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh19Q80TF3 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh19Q80TF3 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh19Q80TF3 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh19Q80TF3 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh19Q80TF3 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh19Q80TF3 Gm12106-201ENSMUST00000116006 1200 ntBASIC12.07□□□□□ -0.48
Pcdh19Q80TF3 Gm7857-201ENSMUST00000117957 358 ntBASIC12.07□□□□□ -0.48
Pcdh19Q80TF3 Gm14208-201ENSMUST00000119645 678 ntBASIC12.07□□□□□ -0.48
Pcdh19Q80TF3 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh19Q80TF3 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
Pcdh19Q80TF3 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Pcdh19Q80TF3 Mir7070-201ENSMUST00000183657 86 ntBASIC12.07□□□□□ -0.48
Pcdh19Q80TF3 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.07□□□□□ -0.48
Pcdh19Q80TF3 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.07□□□□□ -0.48
Pcdh19Q80TF3 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh19Q80TF3 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh19Q80TF3 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh19Q80TF3 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh19Q80TF3 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh19Q80TF3 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh19Q80TF3 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh19Q80TF3 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh19Q80TF3 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh19Q80TF3 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.07□□□□□ -0.48
Pcdh19Q80TF3 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh19Q80TF3 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh19Q80TF3 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh19Q80TF3 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh19Q80TF3 Gm45251-201ENSMUST00000209486 1465 ntBASIC12.07□□□□□ -0.48
Pcdh19Q80TF3 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh19Q80TF3 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh19Q80TF3 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh19Q80TF3 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh19Q80TF3 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh19Q80TF3 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Pcdh19Q80TF3 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh19Q80TF3 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Pcdh19Q80TF3 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.06□□□□□ -0.48
Pcdh19Q80TF3 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh19Q80TF3 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh19Q80TF3 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh19Q80TF3 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh19Q80TF3 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh19Q80TF3 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh19Q80TF3 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh19Q80TF3 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh19Q80TF3 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh19Q80TF3 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh19Q80TF3 Gm4909-201ENSMUST00000118749 794 ntBASIC12.06□□□□□ -0.48
Pcdh19Q80TF3 Gm14760-201ENSMUST00000121831 999 ntBASIC12.06□□□□□ -0.48
Pcdh19Q80TF3 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.06□□□□□ -0.48
Pcdh19Q80TF3 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.06□□□□□ -0.48
Pcdh19Q80TF3 Gm24749-201ENSMUST00000157838 343 ntBASIC12.06□□□□□ -0.48
Pcdh19Q80TF3 Mir5132-201ENSMUST00000175166 71 ntBASIC12.06□□□□□ -0.48
Pcdh19Q80TF3 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Pcdh19Q80TF3 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.06□□□□□ -0.48
Pcdh19Q80TF3 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh19Q80TF3 Gm43138-201ENSMUST00000199123 708 ntBASIC12.06□□□□□ -0.48
Pcdh19Q80TF3 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC12.06□□□□□ -0.48
Pcdh19Q80TF3 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Pcdh19Q80TF3 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh19Q80TF3 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh19Q80TF3 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Pcdh19Q80TF3 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh19Q80TF3 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.06□□□□□ -0.48
Pcdh19Q80TF3 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh19Q80TF3 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Pcdh19Q80TF3 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh19Q80TF3 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh19Q80TF3 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.06□□□□□ -0.48
Pcdh19Q80TF3 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh19Q80TF3 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh19Q80TF3 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh19Q80TF3 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.06□□□□□ -0.48
Pcdh19Q80TF3 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh19Q80TF3 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Pcdh19Q80TF3 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh19Q80TF3 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh19Q80TF3 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh19Q80TF3 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.05□□□□□ -0.48
Pcdh19Q80TF3 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms