Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh8Q7TSK3 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh8Q7TSK3 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh8Q7TSK3 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh8Q7TSK3 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Pcdh8Q7TSK3 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh8Q7TSK3 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh8Q7TSK3 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Pcdh8Q7TSK3 Gm12015-201ENSMUST00000117065 843 ntBASIC12.13□□□□□ -0.47
Pcdh8Q7TSK3 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh8Q7TSK3 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh8Q7TSK3 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh8Q7TSK3 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh8Q7TSK3 Gm8913-201ENSMUST00000209491 641 ntBASIC12.13□□□□□ -0.47
Pcdh8Q7TSK3 Nsd1-205ENSMUST00000224693 852 ntBASIC12.13□□□□□ -0.47
Pcdh8Q7TSK3 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.13□□□□□ -0.47
Pcdh8Q7TSK3 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh8Q7TSK3 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh8Q7TSK3 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh8Q7TSK3 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh8Q7TSK3 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.13□□□□□ -0.47
Pcdh8Q7TSK3 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh8Q7TSK3 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh8Q7TSK3 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh8Q7TSK3 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh8Q7TSK3 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh8Q7TSK3 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh8Q7TSK3 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh8Q7TSK3 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh8Q7TSK3 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh8Q7TSK3 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh8Q7TSK3 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Pcdh8Q7TSK3 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh8Q7TSK3 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh8Q7TSK3 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Pcdh8Q7TSK3 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh8Q7TSK3 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Pcdh8Q7TSK3 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Pcdh8Q7TSK3 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh8Q7TSK3 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.12□□□□□ -0.47
Pcdh8Q7TSK3 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh8Q7TSK3 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.12□□□□□ -0.47
Pcdh8Q7TSK3 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh8Q7TSK3 Gm7857-201ENSMUST00000117957 358 ntBASIC12.12□□□□□ -0.47
Pcdh8Q7TSK3 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh8Q7TSK3 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh8Q7TSK3 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.12□□□□□ -0.47
Pcdh8Q7TSK3 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh8Q7TSK3 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.12□□□□□ -0.47
Pcdh8Q7TSK3 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.12□□□□□ -0.47
Pcdh8Q7TSK3 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.12□□□□□ -0.47
Pcdh8Q7TSK3 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh8Q7TSK3 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.12□□□□□ -0.47
Pcdh8Q7TSK3 Gm45598-202ENSMUST00000210719 986 ntBASIC12.12□□□□□ -0.47
Pcdh8Q7TSK3 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh8Q7TSK3 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh8Q7TSK3 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh8Q7TSK3 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.12□□□□□ -0.47
Pcdh8Q7TSK3 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.12□□□□□ -0.47
Pcdh8Q7TSK3 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh8Q7TSK3 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh8Q7TSK3 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Pcdh8Q7TSK3 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh8Q7TSK3 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh8Q7TSK3 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh8Q7TSK3 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh8Q7TSK3 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh8Q7TSK3 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh8Q7TSK3 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms