Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Gm6485-201ENSMUST00000160676 439 ntBASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Gm6430-201ENSMUST00000054664 1248 ntBASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Gm5705-201ENSMUST00000066241 711 ntBASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC10.78□□□□□ -0.68
Snrnp40Q6PE01 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
Snrnp40Q6PE01 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Snrnp40Q6PE01 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Snrnp40Q6PE01 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Snrnp40Q6PE01 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Snrnp40Q6PE01 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Snrnp40Q6PE01 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC10.77□□□□□ -0.68
Snrnp40Q6PE01 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Snrnp40Q6PE01 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Gm25880-201ENSMUST00000104331 132 ntBASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Gm11949-201ENSMUST00000117640 372 ntBASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Gm15352-201ENSMUST00000118696 270 ntBASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Gm15725-201ENSMUST00000119947 1090 ntBASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Gm12899-201ENSMUST00000120565 551 ntBASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Gm14760-201ENSMUST00000121831 999 ntBASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Gm23045-201ENSMUST00000175041 96 ntBASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Gm25951-201ENSMUST00000175330 64 ntBASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Gm3671-201ENSMUST00000182463 1007 ntBASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Gm42518-201ENSMUST00000196277 938 ntBASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Gm9645-201ENSMUST00000197131 792 ntBASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Gm3793-201ENSMUST00000204973 672 ntBASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Gm44980-201ENSMUST00000205826 314 ntBASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 AC173482.6-201ENSMUST00000225889 1741 ntBASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Gm13384-201ENSMUST00000117166 1344 ntBASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Gm18782-201ENSMUST00000209023 1399 ntBASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Snrnp40Q6PE01 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Snrnp40Q6PE01 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Snrnp40Q6PE01 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Snrnp40Q6PE01 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 97.2 ms