Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 Gm15370-201ENSMUST00000117158 253 ntBASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 Gm13736-201ENSMUST00000119272 253 ntBASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 Gm27023-201ENSMUST00000182372 285 ntBASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 Gm9022-201ENSMUST00000182482 992 ntBASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 Gm37201-201ENSMUST00000191845 523 ntBASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 Olfr284-202ENSMUST00000206647 966 ntBASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 Gm45930-201ENSMUST00000221330 292 ntBASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
ParpbpQ6IRT3 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ParpbpQ6IRT3 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.53□□□□□ -0.56
ParpbpQ6IRT3 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
ParpbpQ6IRT3 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ParpbpQ6IRT3 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ParpbpQ6IRT3 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ParpbpQ6IRT3 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
ParpbpQ6IRT3 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ParpbpQ6IRT3 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ParpbpQ6IRT3 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.53□□□□□ -0.56
ParpbpQ6IRT3 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ParpbpQ6IRT3 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ParpbpQ6IRT3 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ParpbpQ6IRT3 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ParpbpQ6IRT3 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ParpbpQ6IRT3 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ParpbpQ6IRT3 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
ParpbpQ6IRT3 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ParpbpQ6IRT3 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
ParpbpQ6IRT3 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ParpbpQ6IRT3 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ParpbpQ6IRT3 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ParpbpQ6IRT3 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ParpbpQ6IRT3 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.53□□□□□ -0.56
ParpbpQ6IRT3 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
ParpbpQ6IRT3 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ParpbpQ6IRT3 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ParpbpQ6IRT3 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.53□□□□□ -0.56
ParpbpQ6IRT3 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.53□□□□□ -0.56
ParpbpQ6IRT3 Gm2546-201ENSMUST00000182630 991 ntBASIC11.53□□□□□ -0.56
ParpbpQ6IRT3 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.53□□□□□ -0.56
ParpbpQ6IRT3 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ParpbpQ6IRT3 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.53□□□□□ -0.56
ParpbpQ6IRT3 Gm18935-201ENSMUST00000212692 664 ntBASIC11.53□□□□□ -0.56
ParpbpQ6IRT3 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.53□□□□□ -0.56
ParpbpQ6IRT3 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ParpbpQ6IRT3 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ParpbpQ6IRT3 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ParpbpQ6IRT3 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ParpbpQ6IRT3 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ParpbpQ6IRT3 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ParpbpQ6IRT3 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
ParpbpQ6IRT3 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.53□□□□□ -0.56
ParpbpQ6IRT3 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ParpbpQ6IRT3 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ParpbpQ6IRT3 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms