Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Krt39Q6IFX4 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Krt39Q6IFX4 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Krt39Q6IFX4 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Krt39Q6IFX4 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Krt39Q6IFX4 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Krt39Q6IFX4 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Krt39Q6IFX4 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Krt39Q6IFX4 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Krt39Q6IFX4 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Krt39Q6IFX4 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Krt39Q6IFX4 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Krt39Q6IFX4 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.54□□□□□ -0.24
Krt39Q6IFX4 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.54□□□□□ -0.24
Krt39Q6IFX4 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Krt39Q6IFX4 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.54□□□□□ -0.24
Krt39Q6IFX4 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.54□□□□□ -0.24
Krt39Q6IFX4 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.54□□□□□ -0.24
Krt39Q6IFX4 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Krt39Q6IFX4 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Krt39Q6IFX4 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Krt39Q6IFX4 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Krt39Q6IFX4 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Krt39Q6IFX4 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Krt39Q6IFX4 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Krt39Q6IFX4 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Krt39Q6IFX4 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Krt39Q6IFX4 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Krt39Q6IFX4 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC13.54□□□□□ -0.24
Krt39Q6IFX4 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Krt39Q6IFX4 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Krt39Q6IFX4 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Krt39Q6IFX4 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC13.54□□□□□ -0.24
Krt39Q6IFX4 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Krt39Q6IFX4 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Krt39Q6IFX4 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Krt39Q6IFX4 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Krt39Q6IFX4 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Krt39Q6IFX4 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Krt39Q6IFX4 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Krt39Q6IFX4 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Krt39Q6IFX4 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Krt39Q6IFX4 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt39Q6IFX4 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt39Q6IFX4 Gm43267-201ENSMUST00000199664 1796 ntBASIC13.53□□□□□ -0.24
Krt39Q6IFX4 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt39Q6IFX4 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Krt39Q6IFX4 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Krt39Q6IFX4 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Krt39Q6IFX4 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt39Q6IFX4 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Krt39Q6IFX4 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt39Q6IFX4 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Krt39Q6IFX4 Gm12314-201ENSMUST00000118104 538 ntBASIC13.53□□□□□ -0.24
Krt39Q6IFX4 Gm1335-201ENSMUST00000121653 386 ntBASIC13.53□□□□□ -0.24
Krt39Q6IFX4 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.53□□□□□ -0.24
Krt39Q6IFX4 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.53□□□□□ -0.24
Krt39Q6IFX4 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Krt39Q6IFX4 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.53□□□□□ -0.24
Krt39Q6IFX4 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.53□□□□□ -0.24
Krt39Q6IFX4 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.53□□□□□ -0.24
Krt39Q6IFX4 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.53□□□□□ -0.24
Krt39Q6IFX4 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.53□□□□□ -0.24
Krt39Q6IFX4 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.53□□□□□ -0.24
Krt39Q6IFX4 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.53□□□□□ -0.24
Krt39Q6IFX4 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt39Q6IFX4 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt39Q6IFX4 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC13.53□□□□□ -0.24
Krt39Q6IFX4 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt39Q6IFX4 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt39Q6IFX4 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.53□□□□□ -0.24
Krt39Q6IFX4 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.53□□□□□ -0.24
Krt39Q6IFX4 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Krt39Q6IFX4 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt39Q6IFX4 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.53□□□□□ -0.24
Krt39Q6IFX4 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Krt39Q6IFX4 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Krt39Q6IFX4 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt39Q6IFX4 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC13.53□□□□□ -0.24
Krt39Q6IFX4 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt39Q6IFX4 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt39Q6IFX4 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Krt39Q6IFX4 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt39Q6IFX4 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Krt39Q6IFX4 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Krt39Q6IFX4 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Krt39Q6IFX4 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Krt39Q6IFX4 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Krt39Q6IFX4 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC13.52□□□□□ -0.24
Krt39Q6IFX4 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Krt39Q6IFX4 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Krt39Q6IFX4 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Krt39Q6IFX4 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.52□□□□□ -0.25
Krt39Q6IFX4 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Krt39Q6IFX4 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.52□□□□□ -0.25
Krt39Q6IFX4 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC13.52□□□□□ -0.25
Krt39Q6IFX4 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Krt39Q6IFX4 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.52□□□□□ -0.25
Krt39Q6IFX4 Gm39404-201ENSMUST00000216350 313 ntBASIC13.52□□□□□ -0.25
Krt39Q6IFX4 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms