Protein–RNA interactions for Protein: Q6DIC0

Smarca2, Probable global transcription activator SNF2L2, mousemouse

Predictions only

Length 1,577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2Q6DIC0 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smarca2Q6DIC0 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC20.94■□□□□ 0.94
Smarca2Q6DIC0 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Smarca2Q6DIC0 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smarca2Q6DIC0 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Smarca2Q6DIC0 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smarca2Q6DIC0 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Smarca2Q6DIC0 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Smarca2Q6DIC0 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Smarca2Q6DIC0 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smarca2Q6DIC0 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC20.93■□□□□ 0.94
Smarca2Q6DIC0 Gm43380-201ENSMUST00000200421 220 ntBASIC20.93■□□□□ 0.94
Smarca2Q6DIC0 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC20.93■□□□□ 0.94
Smarca2Q6DIC0 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC20.93■□□□□ 0.94
Smarca2Q6DIC0 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smarca2Q6DIC0 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Smarca2Q6DIC0 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smarca2Q6DIC0 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smarca2Q6DIC0 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Smarca2Q6DIC0 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.93■□□□□ 0.94
Smarca2Q6DIC0 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
Smarca2Q6DIC0 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smarca2Q6DIC0 Gm37861-201ENSMUST00000193534 2869 ntBASIC20.93■□□□□ 0.94
Smarca2Q6DIC0 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC20.93■□□□□ 0.94
Smarca2Q6DIC0 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smarca2Q6DIC0 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smarca2Q6DIC0 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Smarca2Q6DIC0 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smarca2Q6DIC0 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smarca2Q6DIC0 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smarca2Q6DIC0 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Smarca2Q6DIC0 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC20.93■□□□□ 0.94
Smarca2Q6DIC0 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Smarca2Q6DIC0 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC20.93■□□□□ 0.94
Smarca2Q6DIC0 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC20.93■□□□□ 0.94
Smarca2Q6DIC0 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Smarca2Q6DIC0 Gm42430-201ENSMUST00000197209 616 ntBASIC20.93■□□□□ 0.94
Smarca2Q6DIC0 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC20.93■□□□□ 0.94
Smarca2Q6DIC0 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smarca2Q6DIC0 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smarca2Q6DIC0 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smarca2Q6DIC0 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarca2Q6DIC0 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarca2Q6DIC0 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarca2Q6DIC0 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarca2Q6DIC0 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Smarca2Q6DIC0 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarca2Q6DIC0 AC164107.1-201ENSMUST00000227730 2161 ntBASIC20.92■□□□□ 0.94
Smarca2Q6DIC0 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Smarca2Q6DIC0 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC20.92■□□□□ 0.94
Smarca2Q6DIC0 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC20.92■□□□□ 0.94
Smarca2Q6DIC0 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarca2Q6DIC0 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarca2Q6DIC0 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarca2Q6DIC0 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarca2Q6DIC0 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC20.92■□□□□ 0.94
Smarca2Q6DIC0 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC20.92■□□□□ 0.94
Smarca2Q6DIC0 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC20.92■□□□□ 0.94
Smarca2Q6DIC0 Gm22379-201ENSMUST00000157480 131 ntBASIC20.92■□□□□ 0.94
Smarca2Q6DIC0 Gm37826-201ENSMUST00000195329 322 ntBASIC20.92■□□□□ 0.94
Smarca2Q6DIC0 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC20.92■□□□□ 0.94
Smarca2Q6DIC0 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Smarca2Q6DIC0 Gm1840-201ENSMUST00000051687 1432 ntBASIC20.92■□□□□ 0.94
Smarca2Q6DIC0 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Smarca2Q6DIC0 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarca2Q6DIC0 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Smarca2Q6DIC0 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.92■□□□□ 0.94
Smarca2Q6DIC0 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC20.92■□□□□ 0.94
Smarca2Q6DIC0 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Smarca2Q6DIC0 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smarca2Q6DIC0 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smarca2Q6DIC0 AC158636.1-201ENSMUST00000220118 1393 ntBASIC20.91■□□□□ 0.94
Smarca2Q6DIC0 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smarca2Q6DIC0 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smarca2Q6DIC0 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
Smarca2Q6DIC0 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Smarca2Q6DIC0 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smarca2Q6DIC0 Gm12274-201ENSMUST00000120062 385 ntBASIC20.91■□□□□ 0.94
Smarca2Q6DIC0 Gm11960-201ENSMUST00000122068 925 ntBASIC20.91■□□□□ 0.94
Smarca2Q6DIC0 Gm26368-201ENSMUST00000157826 118 ntBASIC20.91■□□□□ 0.94
Smarca2Q6DIC0 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Smarca2Q6DIC0 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Smarca2Q6DIC0 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smarca2Q6DIC0 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smarca2Q6DIC0 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smarca2Q6DIC0 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC20.91■□□□□ 0.94
Smarca2Q6DIC0 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smarca2Q6DIC0 AC116503.1-201ENSMUST00000215445 2192 ntBASIC20.91■□□□□ 0.94
Smarca2Q6DIC0 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smarca2Q6DIC0 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smarca2Q6DIC0 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC20.91■□□□□ 0.94
Smarca2Q6DIC0 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smarca2Q6DIC0 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Smarca2Q6DIC0 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smarca2Q6DIC0 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smarca2Q6DIC0 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarca2Q6DIC0 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Smarca2Q6DIC0 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarca2Q6DIC0 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarca2Q6DIC0 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms