Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
VclQ64727 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.08□□□□□ -0.47
VclQ64727 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VclQ64727 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.08□□□□□ -0.48
VclQ64727 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
VclQ64727 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
VclQ64727 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
VclQ64727 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.08□□□□□ -0.48
VclQ64727 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
VclQ64727 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VclQ64727 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VclQ64727 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VclQ64727 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
VclQ64727 Gm24830-201ENSMUST00000102024 166 ntBASIC12.08□□□□□ -0.48
VclQ64727 Gm24934-201ENSMUST00000103764 111 ntBASIC12.08□□□□□ -0.48
VclQ64727 Gm13665-201ENSMUST00000120830 528 ntBASIC12.08□□□□□ -0.48
VclQ64727 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
VclQ64727 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
VclQ64727 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.08□□□□□ -0.48
VclQ64727 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
VclQ64727 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
VclQ64727 Gm25890-201ENSMUST00000177643 165 ntBASIC12.08□□□□□ -0.48
VclQ64727 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.08□□□□□ -0.48
VclQ64727 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.08□□□□□ -0.48
VclQ64727 Gm22614-201ENSMUST00000178300 165 ntBASIC12.08□□□□□ -0.48
VclQ64727 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.08□□□□□ -0.48
VclQ64727 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.08□□□□□ -0.48
VclQ64727 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.08□□□□□ -0.48
VclQ64727 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.08□□□□□ -0.48
VclQ64727 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VclQ64727 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VclQ64727 Gm22042-201ENSMUST00000082989 165 ntBASIC12.08□□□□□ -0.48
VclQ64727 Gm26232-201ENSMUST00000083360 166 ntBASIC12.08□□□□□ -0.48
VclQ64727 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.08□□□□□ -0.48
VclQ64727 Gm26110-201ENSMUST00000083971 165 ntBASIC12.08□□□□□ -0.48
VclQ64727 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VclQ64727 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.08□□□□□ -0.48
VclQ64727 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VclQ64727 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VclQ64727 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VclQ64727 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.08□□□□□ -0.48
VclQ64727 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VclQ64727 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
VclQ64727 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
VclQ64727 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
VclQ64727 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
VclQ64727 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
VclQ64727 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
VclQ64727 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
VclQ64727 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
VclQ64727 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
VclQ64727 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
VclQ64727 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
VclQ64727 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
VclQ64727 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
VclQ64727 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
VclQ64727 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
VclQ64727 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
VclQ64727 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
VclQ64727 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.07□□□□□ -0.48
VclQ64727 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.07□□□□□ -0.48
VclQ64727 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.07□□□□□ -0.48
VclQ64727 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.07□□□□□ -0.48
VclQ64727 Gm24845-201ENSMUST00000158034 109 ntBASIC12.07□□□□□ -0.48
VclQ64727 Gm23119-201ENSMUST00000158610 140 ntBASIC12.07□□□□□ -0.48
VclQ64727 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
VclQ64727 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
VclQ64727 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.07□□□□□ -0.48
VclQ64727 Gm38317-201ENSMUST00000195564 343 ntBASIC12.07□□□□□ -0.48
VclQ64727 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
VclQ64727 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
VclQ64727 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
VclQ64727 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
VclQ64727 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
VclQ64727 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
VclQ64727 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
VclQ64727 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
VclQ64727 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.07□□□□□ -0.48
VclQ64727 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
VclQ64727 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
VclQ64727 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
VclQ64727 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
VclQ64727 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.07□□□□□ -0.48
VclQ64727 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
VclQ64727 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.07□□□□□ -0.48
VclQ64727 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
VclQ64727 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
VclQ64727 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.07□□□□□ -0.48
VclQ64727 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
VclQ64727 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
VclQ64727 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
VclQ64727 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
VclQ64727 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
VclQ64727 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.06□□□□□ -0.48
VclQ64727 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
VclQ64727 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
VclQ64727 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
VclQ64727 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
VclQ64727 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
VclQ64727 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms