Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.83□□□□□ -0.52
Sdc3Q64519 Gm24830-201ENSMUST00000102024 166 ntBASIC11.83□□□□□ -0.52
Sdc3Q64519 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sdc3Q64519 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sdc3Q64519 Gm25890-201ENSMUST00000177643 165 ntBASIC11.83□□□□□ -0.52
Sdc3Q64519 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.83□□□□□ -0.52
Sdc3Q64519 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.83□□□□□ -0.52
Sdc3Q64519 Gm22614-201ENSMUST00000178300 165 ntBASIC11.83□□□□□ -0.52
Sdc3Q64519 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.83□□□□□ -0.52
Sdc3Q64519 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sdc3Q64519 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sdc3Q64519 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sdc3Q64519 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.83□□□□□ -0.52
Sdc3Q64519 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Sdc3Q64519 Gm22042-201ENSMUST00000082989 165 ntBASIC11.83□□□□□ -0.52
Sdc3Q64519 Gm26232-201ENSMUST00000083360 166 ntBASIC11.83□□□□□ -0.52
Sdc3Q64519 Gm24136-201ENSMUST00000083374 165 ntBASIC11.83□□□□□ -0.52
Sdc3Q64519 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.83□□□□□ -0.52
Sdc3Q64519 Gm26110-201ENSMUST00000083971 165 ntBASIC11.83□□□□□ -0.52
Sdc3Q64519 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sdc3Q64519 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sdc3Q64519 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Sdc3Q64519 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sdc3Q64519 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sdc3Q64519 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sdc3Q64519 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Sdc3Q64519 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sdc3Q64519 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.83□□□□□ -0.52
Sdc3Q64519 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sdc3Q64519 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sdc3Q64519 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sdc3Q64519 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sdc3Q64519 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sdc3Q64519 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sdc3Q64519 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sdc3Q64519 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sdc3Q64519 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Sdc3Q64519 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sdc3Q64519 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.82□□□□□ -0.52
Sdc3Q64519 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sdc3Q64519 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sdc3Q64519 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sdc3Q64519 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sdc3Q64519 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sdc3Q64519 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sdc3Q64519 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Sdc3Q64519 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sdc3Q64519 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sdc3Q64519 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sdc3Q64519 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Sdc3Q64519 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sdc3Q64519 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sdc3Q64519 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sdc3Q64519 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Sdc3Q64519 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Sdc3Q64519 Gm15236-201ENSMUST00000117309 379 ntBASIC11.82□□□□□ -0.52
Sdc3Q64519 Gm11930-201ENSMUST00000117788 190 ntBASIC11.82□□□□□ -0.52
Sdc3Q64519 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.82□□□□□ -0.52
Sdc3Q64519 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sdc3Q64519 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.82□□□□□ -0.52
Sdc3Q64519 Gm13570-201ENSMUST00000140763 309 ntBASIC11.82□□□□□ -0.52
Sdc3Q64519 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.82□□□□□ -0.52
Sdc3Q64519 Gm24845-201ENSMUST00000158034 109 ntBASIC11.82□□□□□ -0.52
Sdc3Q64519 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sdc3Q64519 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.82□□□□□ -0.52
Sdc3Q64519 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sdc3Q64519 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sdc3Q64519 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.82□□□□□ -0.52
Sdc3Q64519 Gm3096-201ENSMUST00000185770 364 ntBASIC11.82□□□□□ -0.52
Sdc3Q64519 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.82□□□□□ -0.52
Sdc3Q64519 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Sdc3Q64519 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.82□□□□□ -0.52
Sdc3Q64519 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sdc3Q64519 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sdc3Q64519 Gm10076-201ENSMUST00000073238 384 ntBASIC11.82□□□□□ -0.52
Sdc3Q64519 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Sdc3Q64519 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Sdc3Q64519 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sdc3Q64519 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Sdc3Q64519 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sdc3Q64519 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.82□□□□□ -0.52
Sdc3Q64519 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sdc3Q64519 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sdc3Q64519 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Sdc3Q64519 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Sdc3Q64519 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.82□□□□□ -0.52
Sdc3Q64519 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.82□□□□□ -0.52
Sdc3Q64519 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sdc3Q64519 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.82□□□□□ -0.52
Sdc3Q64519 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sdc3Q64519 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.82□□□□□ -0.52
Sdc3Q64519 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sdc3Q64519 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sdc3Q64519 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Sdc3Q64519 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sdc3Q64519 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sdc3Q64519 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sdc3Q64519 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Sdc3Q64519 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Sdc3Q64519 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms