Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gm9135-201ENSMUST00000182963 990 ntBASIC14.16□□□□□ -0.14
Scn9aQ62205 Gm5780-201ENSMUST00000217774 1834 ntBASIC14.16□□□□□ -0.14
Scn9aQ62205 AC122346.3-201ENSMUST00000223983 306 ntBASIC14.16□□□□□ -0.14
Scn9aQ62205 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn9aQ62205 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Scn9aQ62205 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Scn9aQ62205 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scn9aQ62205 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn9aQ62205 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn9aQ62205 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC14.15□□□□□ -0.14
Scn9aQ62205 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Scn9aQ62205 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Scn9aQ62205 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn9aQ62205 Gm25053-201ENSMUST00000103982 133 ntBASIC14.15□□□□□ -0.14
Scn9aQ62205 Gm25922-201ENSMUST00000104281 130 ntBASIC14.15□□□□□ -0.14
Scn9aQ62205 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC14.15□□□□□ -0.14
Scn9aQ62205 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC14.15□□□□□ -0.14
Scn9aQ62205 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Scn9aQ62205 Gm13117-201ENSMUST00000120894 691 ntBASIC14.15□□□□□ -0.14
Scn9aQ62205 Gm24679-201ENSMUST00000158762 111 ntBASIC14.15□□□□□ -0.14
Scn9aQ62205 Gm17192-201ENSMUST00000169031 511 ntBASIC14.15□□□□□ -0.14
Scn9aQ62205 Gm9630-201ENSMUST00000178304 885 ntBASIC14.15□□□□□ -0.14
Scn9aQ62205 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Scn9aQ62205 Gm25053-202ENSMUST00000199731 132 ntBASIC14.15□□□□□ -0.14
Scn9aQ62205 AC114645.1-201ENSMUST00000215831 187 ntBASIC14.15□□□□□ -0.14
Scn9aQ62205 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Scn9aQ62205 Zfp125-201ENSMUST00000079237 2488 ntBASIC14.15□□□□□ -0.14
Scn9aQ62205 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn9aQ62205 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.15□□□□□ -0.14
Scn9aQ62205 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn9aQ62205 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Scn9aQ62205 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Scn9aQ62205 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.15□□□□□ -0.14
Scn9aQ62205 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn9aQ62205 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn9aQ62205 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn9aQ62205 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn9aQ62205 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn9aQ62205 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Scn9aQ62205 Gm13351-201ENSMUST00000118087 414 ntBASIC14.14□□□□□ -0.15
Scn9aQ62205 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC14.14□□□□□ -0.15
Scn9aQ62205 Gm9507-202ENSMUST00000180157 654 ntBASIC14.14□□□□□ -0.15
Scn9aQ62205 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC14.14□□□□□ -0.15
Scn9aQ62205 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC14.14□□□□□ -0.15
Scn9aQ62205 AC154361.2-201ENSMUST00000224747 943 ntBASIC14.14□□□□□ -0.15
Scn9aQ62205 Gm23105-201ENSMUST00000083719 134 ntBASIC14.14□□□□□ -0.15
Scn9aQ62205 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Scn9aQ62205 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Scn9aQ62205 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn9aQ62205 Gm37348-201ENSMUST00000193104 1789 ntBASIC14.14□□□□□ -0.15
Scn9aQ62205 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Scn9aQ62205 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.14□□□□□ -0.15
Scn9aQ62205 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
Scn9aQ62205 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn9aQ62205 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn9aQ62205 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn9aQ62205 Gm10807-201ENSMUST00000177134 795 ntBASIC14.14□□□□□ -0.15
Scn9aQ62205 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Scn9aQ62205 Gm18499-201ENSMUST00000220808 1021 ntBASIC14.14□□□□□ -0.15
Scn9aQ62205 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn9aQ62205 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Scn9aQ62205 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn9aQ62205 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn9aQ62205 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn9aQ62205 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn9aQ62205 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn9aQ62205 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Scn9aQ62205 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn9aQ62205 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Scn9aQ62205 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn9aQ62205 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn9aQ62205 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn9aQ62205 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn9aQ62205 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn9aQ62205 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Scn9aQ62205 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn9aQ62205 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn9aQ62205 Gm43334-201ENSMUST00000197740 1318 ntBASIC14.13□□□□□ -0.15
Scn9aQ62205 Acot6-202ENSMUST00000222921 3622 ntBASIC14.13□□□□□ -0.15
Scn9aQ62205 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC14.13□□□□□ -0.15
Scn9aQ62205 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Scn9aQ62205 Gm25604-201ENSMUST00000158359 133 ntBASIC14.13□□□□□ -0.15
Scn9aQ62205 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Scn9aQ62205 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn9aQ62205 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Scn9aQ62205 Gm6855-201ENSMUST00000206307 790 ntBASIC14.13□□□□□ -0.15
Scn9aQ62205 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn9aQ62205 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC14.13□□□□□ -0.15
Scn9aQ62205 AC164618.2-201ENSMUST00000224770 573 ntBASIC14.13□□□□□ -0.15
Scn9aQ62205 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn9aQ62205 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn9aQ62205 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn9aQ62205 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Scn9aQ62205 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Scn9aQ62205 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn9aQ62205 Adra1a-206ENSMUST00000225182 2337 ntBASIC14.13□□□□□ -0.15
Scn9aQ62205 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC14.13□□□□□ -0.15
Scn9aQ62205 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn9aQ62205 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Scn9aQ62205 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms