Protein–RNA interactions for Protein: Q61488

Dhh, Desert hedgehog protein, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DhhQ61488 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC10.8□□□□□ -0.68
DhhQ61488 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC10.8□□□□□ -0.68
DhhQ61488 Ighv1-62-201ENSMUST00000193406 350 ntBASIC10.8□□□□□ -0.68
DhhQ61488 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC10.8□□□□□ -0.68
DhhQ61488 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC10.8□□□□□ -0.68
DhhQ61488 Gm6082-201ENSMUST00000215204 454 ntBASIC10.8□□□□□ -0.68
DhhQ61488 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
DhhQ61488 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
DhhQ61488 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
DhhQ61488 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
DhhQ61488 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
DhhQ61488 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
DhhQ61488 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
DhhQ61488 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
DhhQ61488 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
DhhQ61488 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
DhhQ61488 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
DhhQ61488 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
DhhQ61488 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
DhhQ61488 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
DhhQ61488 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.8□□□□□ -0.68
DhhQ61488 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
DhhQ61488 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
DhhQ61488 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
DhhQ61488 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
DhhQ61488 Gm44414-201ENSMUST00000203660 2109 ntBASIC10.79□□□□□ -0.68
DhhQ61488 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
DhhQ61488 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
DhhQ61488 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.79□□□□□ -0.68
DhhQ61488 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
DhhQ61488 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
DhhQ61488 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
DhhQ61488 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
DhhQ61488 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
DhhQ61488 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
DhhQ61488 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC10.79□□□□□ -0.68
DhhQ61488 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC10.79□□□□□ -0.68
DhhQ61488 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
DhhQ61488 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
DhhQ61488 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC10.79□□□□□ -0.68
DhhQ61488 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
DhhQ61488 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
DhhQ61488 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
DhhQ61488 Mir3547-201ENSMUST00000175461 88 ntBASIC10.79□□□□□ -0.68
DhhQ61488 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC10.79□□□□□ -0.68
DhhQ61488 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC10.79□□□□□ -0.68
DhhQ61488 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
DhhQ61488 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
DhhQ61488 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
DhhQ61488 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
DhhQ61488 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
DhhQ61488 Gm5422-201ENSMUST00000050717 2721 ntBASIC10.79□□□□□ -0.68
DhhQ61488 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
DhhQ61488 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.79□□□□□ -0.68
DhhQ61488 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
DhhQ61488 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
DhhQ61488 Gm13142-201ENSMUST00000117213 1453 ntBASIC10.79□□□□□ -0.68
DhhQ61488 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
DhhQ61488 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
DhhQ61488 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
DhhQ61488 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
DhhQ61488 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
DhhQ61488 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.79□□□□□ -0.68
DhhQ61488 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
DhhQ61488 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
DhhQ61488 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
DhhQ61488 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
DhhQ61488 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
DhhQ61488 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
DhhQ61488 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
DhhQ61488 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
DhhQ61488 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
DhhQ61488 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.78□□□□□ -0.68
DhhQ61488 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
DhhQ61488 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
DhhQ61488 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC10.78□□□□□ -0.68
DhhQ61488 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
DhhQ61488 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
DhhQ61488 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
DhhQ61488 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
DhhQ61488 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
DhhQ61488 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.78□□□□□ -0.68
DhhQ61488 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
DhhQ61488 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
DhhQ61488 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.78□□□□□ -0.68
DhhQ61488 Gm24934-201ENSMUST00000103764 111 ntBASIC10.78□□□□□ -0.68
DhhQ61488 Gm11222-201ENSMUST00000119005 738 ntBASIC10.78□□□□□ -0.68
DhhQ61488 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
DhhQ61488 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
DhhQ61488 Gm17376-201ENSMUST00000166016 84 ntBASIC10.78□□□□□ -0.68
DhhQ61488 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
DhhQ61488 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
DhhQ61488 Gm4819-201ENSMUST00000182170 1009 ntBASIC10.78□□□□□ -0.68
DhhQ61488 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
DhhQ61488 Gm5363-201ENSMUST00000211927 938 ntBASIC10.78□□□□□ -0.68
DhhQ61488 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
DhhQ61488 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
DhhQ61488 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
DhhQ61488 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
DhhQ61488 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms