Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Six4Q61321 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Six4Q61321 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.35□□□□□ -0.43
Six4Q61321 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Six4Q61321 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Six4Q61321 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Six4Q61321 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Six4Q61321 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Six4Q61321 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.35□□□□□ -0.43
Six4Q61321 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.35□□□□□ -0.43
Six4Q61321 Gm23912-201ENSMUST00000104687 87 ntBASIC12.35□□□□□ -0.43
Six4Q61321 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Six4Q61321 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Six4Q61321 Gm7722-201ENSMUST00000120646 741 ntBASIC12.35□□□□□ -0.43
Six4Q61321 Gm14247-201ENSMUST00000120950 237 ntBASIC12.35□□□□□ -0.43
Six4Q61321 Gm12164-201ENSMUST00000121695 551 ntBASIC12.35□□□□□ -0.43
Six4Q61321 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.35□□□□□ -0.43
Six4Q61321 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Six4Q61321 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Six4Q61321 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Six4Q61321 Gm25890-201ENSMUST00000177643 165 ntBASIC12.35□□□□□ -0.43
Six4Q61321 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.35□□□□□ -0.43
Six4Q61321 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.35□□□□□ -0.43
Six4Q61321 Gm22614-201ENSMUST00000178300 165 ntBASIC12.35□□□□□ -0.43
Six4Q61321 Gm9230-201ENSMUST00000188228 532 ntBASIC12.35□□□□□ -0.43
Six4Q61321 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Six4Q61321 Gm18711-201ENSMUST00000199341 750 ntBASIC12.35□□□□□ -0.43
Six4Q61321 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.35□□□□□ -0.43
Six4Q61321 Gm19187-201ENSMUST00000206781 892 ntBASIC12.35□□□□□ -0.43
Six4Q61321 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.35□□□□□ -0.43
Six4Q61321 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Six4Q61321 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.35□□□□□ -0.43
Six4Q61321 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.35□□□□□ -0.43
Six4Q61321 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Six4Q61321 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Six4Q61321 Gm22042-201ENSMUST00000082989 165 ntBASIC12.35□□□□□ -0.43
Six4Q61321 Gm26110-201ENSMUST00000083971 165 ntBASIC12.35□□□□□ -0.43
Six4Q61321 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Six4Q61321 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Six4Q61321 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Six4Q61321 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Six4Q61321 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Six4Q61321 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.35□□□□□ -0.43
Six4Q61321 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Six4Q61321 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Six4Q61321 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Six4Q61321 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Six4Q61321 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Six4Q61321 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Six4Q61321 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Six4Q61321 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.34□□□□□ -0.43
Six4Q61321 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Six4Q61321 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six4Q61321 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.34□□□□□ -0.43
Six4Q61321 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six4Q61321 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Six4Q61321 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six4Q61321 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Six4Q61321 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Six4Q61321 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six4Q61321 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Six4Q61321 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.34□□□□□ -0.43
Six4Q61321 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six4Q61321 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.34□□□□□ -0.43
Six4Q61321 Gm11989-201ENSMUST00000117240 672 ntBASIC12.34□□□□□ -0.43
Six4Q61321 Gm11362-201ENSMUST00000118838 850 ntBASIC12.34□□□□□ -0.43
Six4Q61321 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Six4Q61321 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Six4Q61321 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Six4Q61321 Rprl1-202ENSMUST00000198476 238 ntBASIC12.34□□□□□ -0.43
Six4Q61321 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six4Q61321 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.34□□□□□ -0.43
Six4Q61321 Gm45598-202ENSMUST00000210719 986 ntBASIC12.34□□□□□ -0.43
Six4Q61321 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.34□□□□□ -0.43
Six4Q61321 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six4Q61321 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.34□□□□□ -0.43
Six4Q61321 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six4Q61321 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six4Q61321 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six4Q61321 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.34□□□□□ -0.43
Six4Q61321 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six4Q61321 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.34□□□□□ -0.43
Six4Q61321 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six4Q61321 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Six4Q61321 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six4Q61321 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six4Q61321 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.34□□□□□ -0.43
Six4Q61321 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Six4Q61321 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Six4Q61321 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Six4Q61321 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Six4Q61321 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Six4Q61321 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six4Q61321 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six4Q61321 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Six4Q61321 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six4Q61321 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Six4Q61321 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six4Q61321 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.33□□□□□ -0.44
Six4Q61321 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms