Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC13.44□□□□□ -0.26
Col11a1Q61245 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC13.44□□□□□ -0.26
Col11a1Q61245 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col11a1Q61245 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col11a1Q61245 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col11a1Q61245 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC13.44□□□□□ -0.26
Col11a1Q61245 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC13.44□□□□□ -0.26
Col11a1Q61245 Gm26368-201ENSMUST00000157826 118 ntBASIC13.44□□□□□ -0.26
Col11a1Q61245 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col11a1Q61245 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col11a1Q61245 Gm17709-201ENSMUST00000174536 1096 ntBASIC13.44□□□□□ -0.26
Col11a1Q61245 Gm25998-201ENSMUST00000175397 53 ntBASIC13.44□□□□□ -0.26
Col11a1Q61245 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC13.44□□□□□ -0.26
Col11a1Q61245 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Col11a1Q61245 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
Col11a1Q61245 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col11a1Q61245 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col11a1Q61245 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col11a1Q61245 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Col11a1Q61245 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col11a1Q61245 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Col11a1Q61245 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col11a1Q61245 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col11a1Q61245 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col11a1Q61245 Gm6831-202ENSMUST00000213025 1673 ntBASIC13.44□□□□□ -0.26
Col11a1Q61245 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col11a1Q61245 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col11a1Q61245 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Col11a1Q61245 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col11a1Q61245 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col11a1Q61245 Map1b-203ENSMUST00000223725 2669 ntBASIC13.44□□□□□ -0.26
Col11a1Q61245 AC093022.4-203ENSMUST00000228523 2657 ntBASIC13.44□□□□□ -0.26
Col11a1Q61245 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Col11a1Q61245 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col11a1Q61245 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.44□□□□□ -0.26
Col11a1Q61245 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col11a1Q61245 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col11a1Q61245 Gm11560-201ENSMUST00000117567 948 ntBASIC13.43□□□□□ -0.26
Col11a1Q61245 Gm13445-201ENSMUST00000121664 307 ntBASIC13.43□□□□□ -0.26
Col11a1Q61245 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC13.43□□□□□ -0.26
Col11a1Q61245 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC13.43□□□□□ -0.26
Col11a1Q61245 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col11a1Q61245 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Col11a1Q61245 Gm42430-201ENSMUST00000197209 616 ntBASIC13.43□□□□□ -0.26
Col11a1Q61245 Gm17825-201ENSMUST00000206836 794 ntBASIC13.43□□□□□ -0.26
Col11a1Q61245 AC153152.3-201ENSMUST00000222188 1135 ntBASIC13.43□□□□□ -0.26
Col11a1Q61245 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col11a1Q61245 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col11a1Q61245 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
Col11a1Q61245 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Col11a1Q61245 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.43□□□□□ -0.26
Col11a1Q61245 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col11a1Q61245 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col11a1Q61245 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col11a1Q61245 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col11a1Q61245 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col11a1Q61245 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
Col11a1Q61245 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC13.43□□□□□ -0.26
Col11a1Q61245 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col11a1Q61245 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Col11a1Q61245 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Col11a1Q61245 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col11a1Q61245 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Col11a1Q61245 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col11a1Q61245 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col11a1Q61245 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col11a1Q61245 Gm14270-201ENSMUST00000118388 846 ntBASIC13.43□□□□□ -0.26
Col11a1Q61245 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Col11a1Q61245 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col11a1Q61245 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Col11a1Q61245 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col11a1Q61245 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC13.43□□□□□ -0.26
Col11a1Q61245 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC13.43□□□□□ -0.26
Col11a1Q61245 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Col11a1Q61245 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC13.43□□□□□ -0.26
Col11a1Q61245 Gm43854-201ENSMUST00000200418 394 ntBASIC13.43□□□□□ -0.26
Col11a1Q61245 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC13.43□□□□□ -0.26
Col11a1Q61245 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC13.43□□□□□ -0.26
Col11a1Q61245 AC158388.3-202ENSMUST00000225517 775 ntBASIC13.43□□□□□ -0.26
Col11a1Q61245 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col11a1Q61245 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Col11a1Q61245 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Col11a1Q61245 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col11a1Q61245 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC13.42□□□□□ -0.26
Col11a1Q61245 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col11a1Q61245 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col11a1Q61245 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Col11a1Q61245 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
Col11a1Q61245 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col11a1Q61245 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col11a1Q61245 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col11a1Q61245 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col11a1Q61245 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col11a1Q61245 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Col11a1Q61245 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col11a1Q61245 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col11a1Q61245 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col11a1Q61245 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col11a1Q61245 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col11a1Q61245 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms