Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Slc6a4Q60857 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Slc6a4Q60857 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Slc6a4Q60857 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Slc6a4Q60857 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Slc6a4Q60857 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Slc6a4Q60857 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Slc6a4Q60857 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Slc6a4Q60857 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.55□□□□□ -0.4
Slc6a4Q60857 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.55□□□□□ -0.4
Slc6a4Q60857 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.55□□□□□ -0.4
Slc6a4Q60857 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.55□□□□□ -0.4
Slc6a4Q60857 Gm12164-201ENSMUST00000121695 551 ntBASIC12.55□□□□□ -0.4
Slc6a4Q60857 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Slc6a4Q60857 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.55□□□□□ -0.4
Slc6a4Q60857 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Slc6a4Q60857 Gm18711-201ENSMUST00000199341 750 ntBASIC12.55□□□□□ -0.4
Slc6a4Q60857 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Slc6a4Q60857 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Slc6a4Q60857 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.55□□□□□ -0.4
Slc6a4Q60857 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.55□□□□□ -0.4
Slc6a4Q60857 Gm19208-201ENSMUST00000213861 912 ntBASIC12.55□□□□□ -0.4
Slc6a4Q60857 Gm18730-201ENSMUST00000218038 343 ntBASIC12.55□□□□□ -0.4
Slc6a4Q60857 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.55□□□□□ -0.4
Slc6a4Q60857 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Slc6a4Q60857 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Slc6a4Q60857 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Slc6a4Q60857 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Slc6a4Q60857 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.55□□□□□ -0.4
Slc6a4Q60857 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.55□□□□□ -0.4
Slc6a4Q60857 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Slc6a4Q60857 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Slc6a4Q60857 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Slc6a4Q60857 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.55□□□□□ -0.4
Slc6a4Q60857 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.55□□□□□ -0.4
Slc6a4Q60857 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Slc6a4Q60857 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a4Q60857 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.54□□□□□ -0.4
Slc6a4Q60857 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.54□□□□□ -0.4
Slc6a4Q60857 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a4Q60857 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a4Q60857 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a4Q60857 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a4Q60857 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a4Q60857 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a4Q60857 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a4Q60857 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Slc6a4Q60857 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a4Q60857 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Slc6a4Q60857 Gm22133-201ENSMUST00000102082 109 ntBASIC12.54□□□□□ -0.4
Slc6a4Q60857 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.54□□□□□ -0.4
Slc6a4Q60857 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.54□□□□□ -0.4
Slc6a4Q60857 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.54□□□□□ -0.4
Slc6a4Q60857 Gm28071-201ENSMUST00000190355 478 ntBASIC12.54□□□□□ -0.4
Slc6a4Q60857 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.54□□□□□ -0.4
Slc6a4Q60857 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a4Q60857 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a4Q60857 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a4Q60857 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a4Q60857 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a4Q60857 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.54□□□□□ -0.4
Slc6a4Q60857 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.54□□□□□ -0.4
Slc6a4Q60857 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a4Q60857 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a4Q60857 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.54□□□□□ -0.4
Slc6a4Q60857 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a4Q60857 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.54□□□□□ -0.4
Slc6a4Q60857 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
Slc6a4Q60857 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.54□□□□□ -0.4
Slc6a4Q60857 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.54□□□□□ -0.4
Slc6a4Q60857 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a4Q60857 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a4Q60857 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.54□□□□□ -0.4
Slc6a4Q60857 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a4Q60857 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a4Q60857 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a4Q60857 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Slc6a4Q60857 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.53□□□□□ -0.4
Slc6a4Q60857 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a4Q60857 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a4Q60857 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a4Q60857 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a4Q60857 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a4Q60857 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a4Q60857 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Slc6a4Q60857 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.53□□□□□ -0.4
Slc6a4Q60857 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a4Q60857 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a4Q60857 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a4Q60857 Gm23912-201ENSMUST00000104687 87 ntBASIC12.53□□□□□ -0.4
Slc6a4Q60857 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Slc6a4Q60857 Gm17040-202ENSMUST00000170597 889 ntBASIC12.53□□□□□ -0.4
Slc6a4Q60857 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a4Q60857 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.53□□□□□ -0.4
Slc6a4Q60857 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Slc6a4Q60857 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a4Q60857 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.53□□□□□ -0.4
Slc6a4Q60857 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a4Q60857 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.53□□□□□ -0.4
Slc6a4Q60857 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms