Protein–RNA interactions for Protein: Q60688

Foxd4, Forkhead box protein D4, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd4Q60688 AC069561.1-201ENSMUST00000213750 424 ntBASIC13.02□□□□□ -0.33
Foxd4Q60688 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Foxd4Q60688 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.02□□□□□ -0.33
Foxd4Q60688 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.02□□□□□ -0.33
Foxd4Q60688 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Foxd4Q60688 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Foxd4Q60688 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Foxd4Q60688 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Foxd4Q60688 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Foxd4Q60688 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Foxd4Q60688 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Foxd4Q60688 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Foxd4Q60688 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.02□□□□□ -0.33
Foxd4Q60688 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Foxd4Q60688 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Foxd4Q60688 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Foxd4Q60688 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Foxd4Q60688 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Foxd4Q60688 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Foxd4Q60688 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Foxd4Q60688 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Foxd4Q60688 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Foxd4Q60688 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Foxd4Q60688 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Foxd4Q60688 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.02□□□□□ -0.33
Foxd4Q60688 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Foxd4Q60688 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Foxd4Q60688 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Foxd4Q60688 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.02□□□□□ -0.33
Foxd4Q60688 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Foxd4Q60688 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Foxd4Q60688 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.01□□□□□ -0.33
Foxd4Q60688 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Foxd4Q60688 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxd4Q60688 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Foxd4Q60688 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Foxd4Q60688 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxd4Q60688 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxd4Q60688 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Foxd4Q60688 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxd4Q60688 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.01□□□□□ -0.33
Foxd4Q60688 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxd4Q60688 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxd4Q60688 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxd4Q60688 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Foxd4Q60688 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.01□□□□□ -0.33
Foxd4Q60688 Gm12390-201ENSMUST00000117897 397 ntBASIC13.01□□□□□ -0.33
Foxd4Q60688 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.01□□□□□ -0.33
Foxd4Q60688 Gm8215-201ENSMUST00000120627 990 ntBASIC13.01□□□□□ -0.33
Foxd4Q60688 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxd4Q60688 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxd4Q60688 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Foxd4Q60688 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxd4Q60688 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Foxd4Q60688 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Foxd4Q60688 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Foxd4Q60688 Gm3489-201ENSMUST00000190083 528 ntBASIC13.01□□□□□ -0.33
Foxd4Q60688 Gm42710-201ENSMUST00000200608 985 ntBASIC13.01□□□□□ -0.33
Foxd4Q60688 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.01□□□□□ -0.33
Foxd4Q60688 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.01□□□□□ -0.33
Foxd4Q60688 Gm6458-201ENSMUST00000211573 635 ntBASIC13.01□□□□□ -0.33
Foxd4Q60688 AC159297.2-201ENSMUST00000219567 1075 ntBASIC13.01□□□□□ -0.33
Foxd4Q60688 Gm46436-201ENSMUST00000221851 1294 ntBASIC13.01□□□□□ -0.33
Foxd4Q60688 Speer6-ps1-203ENSMUST00000223482 979 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Foxd4Q60688 Pdcl2-201ENSMUST00000031145 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxd4Q60688 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxd4Q60688 Gm5356-201ENSMUST00000093326 615 ntBASIC13.01□□□□□ -0.33
Foxd4Q60688 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxd4Q60688 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Foxd4Q60688 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Foxd4Q60688 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.01□□□□□ -0.33
Foxd4Q60688 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Foxd4Q60688 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.01□□□□□ -0.33
Foxd4Q60688 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Foxd4Q60688 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Foxd4Q60688 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxd4Q60688 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxd4Q60688 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxd4Q60688 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxd4Q60688 Olfr23-202ENSMUST00000214210 2527 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Foxd4Q60688 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Foxd4Q60688 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Foxd4Q60688 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxd4Q60688 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxd4Q60688 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxd4Q60688 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxd4Q60688 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Foxd4Q60688 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxd4Q60688 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Foxd4Q60688 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Foxd4Q60688 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Foxd4Q60688 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC13□□□□□ -0.33
Foxd4Q60688 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Foxd4Q60688 Gm42449-201ENSMUST00000200349 2258 ntBASIC13□□□□□ -0.33
Foxd4Q60688 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Foxd4Q60688 Gm43868-201ENSMUST00000205187 2114 ntBASIC13□□□□□ -0.33
Foxd4Q60688 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Foxd4Q60688 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Foxd4Q60688 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Foxd4Q60688 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms