Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps54Q5SPW0 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps54Q5SPW0 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Vps54Q5SPW0 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC14.7□□□□□ -0.06
Vps54Q5SPW0 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps54Q5SPW0 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Vps54Q5SPW0 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps54Q5SPW0 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps54Q5SPW0 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vps54Q5SPW0 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps54Q5SPW0 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps54Q5SPW0 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Vps54Q5SPW0 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps54Q5SPW0 AC154671.1-201ENSMUST00000228617 1578 ntBASIC14.69□□□□□ -0.06
Vps54Q5SPW0 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps54Q5SPW0 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps54Q5SPW0 Gm29100-201ENSMUST00000187564 4410 ntBASIC14.69□□□□□ -0.06
Vps54Q5SPW0 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps54Q5SPW0 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC14.69□□□□□ -0.06
Vps54Q5SPW0 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC14.69□□□□□ -0.06
Vps54Q5SPW0 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps54Q5SPW0 Gm5053-201ENSMUST00000208361 1678 ntBASIC14.69□□□□□ -0.06
Vps54Q5SPW0 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps54Q5SPW0 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC14.69□□□□□ -0.06
Vps54Q5SPW0 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps54Q5SPW0 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps54Q5SPW0 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps54Q5SPW0 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC14.69□□□□□ -0.06
Vps54Q5SPW0 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Vps54Q5SPW0 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vps54Q5SPW0 Gm18711-201ENSMUST00000199341 750 ntBASIC14.69□□□□□ -0.06
Vps54Q5SPW0 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC14.69□□□□□ -0.06
Vps54Q5SPW0 AC153954.1-201ENSMUST00000216959 255 ntBASIC14.69□□□□□ -0.06
Vps54Q5SPW0 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps54Q5SPW0 Gm8385-201ENSMUST00000058999 643 ntBASIC14.69□□□□□ -0.06
Vps54Q5SPW0 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC14.69□□□□□ -0.06
Vps54Q5SPW0 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps54Q5SPW0 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vps54Q5SPW0 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps54Q5SPW0 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vps54Q5SPW0 Gm18782-201ENSMUST00000209023 1399 ntBASIC14.69□□□□□ -0.06
Vps54Q5SPW0 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps54Q5SPW0 Gm27177-202ENSMUST00000183514 2703 ntBASIC14.69□□□□□ -0.06
Vps54Q5SPW0 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Vps54Q5SPW0 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Vps54Q5SPW0 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps54Q5SPW0 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps54Q5SPW0 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC14.68□□□□□ -0.06
Vps54Q5SPW0 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Vps54Q5SPW0 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps54Q5SPW0 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Vps54Q5SPW0 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Vps54Q5SPW0 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps54Q5SPW0 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC14.68□□□□□ -0.06
Vps54Q5SPW0 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps54Q5SPW0 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC14.68□□□□□ -0.06
Vps54Q5SPW0 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vps54Q5SPW0 Gm23912-201ENSMUST00000104687 87 ntBASIC14.68□□□□□ -0.06
Vps54Q5SPW0 Gm11439-201ENSMUST00000118598 409 ntBASIC14.68□□□□□ -0.06
Vps54Q5SPW0 Gm14247-201ENSMUST00000120950 237 ntBASIC14.68□□□□□ -0.06
Vps54Q5SPW0 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps54Q5SPW0 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Vps54Q5SPW0 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vps54Q5SPW0 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vps54Q5SPW0 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC14.68□□□□□ -0.06
Vps54Q5SPW0 Gm21027-201ENSMUST00000219300 1236 ntBASIC14.68□□□□□ -0.06
Vps54Q5SPW0 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC14.68□□□□□ -0.06
Vps54Q5SPW0 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC14.68□□□□□ -0.06
Vps54Q5SPW0 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps54Q5SPW0 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps54Q5SPW0 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vps54Q5SPW0 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Vps54Q5SPW0 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps54Q5SPW0 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps54Q5SPW0 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps54Q5SPW0 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps54Q5SPW0 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps54Q5SPW0 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps54Q5SPW0 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Vps54Q5SPW0 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Vps54Q5SPW0 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps54Q5SPW0 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vps54Q5SPW0 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps54Q5SPW0 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps54Q5SPW0 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps54Q5SPW0 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Vps54Q5SPW0 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC14.67□□□□□ -0.06
Vps54Q5SPW0 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps54Q5SPW0 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps54Q5SPW0 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC14.67□□□□□ -0.06
Vps54Q5SPW0 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps54Q5SPW0 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC14.67□□□□□ -0.06
Vps54Q5SPW0 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps54Q5SPW0 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC14.67□□□□□ -0.06
Vps54Q5SPW0 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps54Q5SPW0 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps54Q5SPW0 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps54Q5SPW0 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps54Q5SPW0 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Vps54Q5SPW0 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms