Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC9.21□□□□□ -0.94
Trav3-3Q5R1C3 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav3-3Q5R1C3 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Trav3-3Q5R1C3 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav3-3Q5R1C3 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav3-3Q5R1C3 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav3-3Q5R1C3 Gm36940-201ENSMUST00000194281 2036 ntBASIC9.21□□□□□ -0.94
Trav3-3Q5R1C3 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 Gm9025-201ENSMUST00000122415 1575 ntBASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 AC113060.1-201ENSMUST00000225689 1573 ntBASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 Gm11594-201ENSMUST00000122313 162 ntBASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 Gm17330-201ENSMUST00000221047 165 ntBASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 AC154621.1-201ENSMUST00000226155 1119 ntBASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 Fgf17-202ENSMUST00000227123 1336 ntBASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Trav3-3Q5R1C3 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Gm4995-201ENSMUST00000117247 432 ntBASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Gm13453-201ENSMUST00000118708 357 ntBASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Gm26308-201ENSMUST00000157768 69 ntBASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trav3-3Q5R1C3 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms