Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm8152-201ENSMUST00000120842 637 ntBASIC11.24□□□□□ -0.61
Spg11Q3UHA3 Gm5267-201ENSMUST00000191574 1045 ntBASIC11.24□□□□□ -0.61
Spg11Q3UHA3 Gm37452-201ENSMUST00000194416 1160 ntBASIC11.24□□□□□ -0.61
Spg11Q3UHA3 Gm43866-201ENSMUST00000203894 839 ntBASIC11.24□□□□□ -0.61
Spg11Q3UHA3 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Spg11Q3UHA3 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC11.24□□□□□ -0.61
Spg11Q3UHA3 AC152169.1-201ENSMUST00000223901 701 ntBASIC11.24□□□□□ -0.61
Spg11Q3UHA3 CT025689.1-201ENSMUST00000225214 283 ntBASIC11.24□□□□□ -0.61
Spg11Q3UHA3 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Spg11Q3UHA3 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.24□□□□□ -0.61
Spg11Q3UHA3 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Spg11Q3UHA3 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Spg11Q3UHA3 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Spg11Q3UHA3 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC11.23□□□□□ -0.61
Spg11Q3UHA3 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Spg11Q3UHA3 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Spg11Q3UHA3 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Spg11Q3UHA3 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Spg11Q3UHA3 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Spg11Q3UHA3 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Spg11Q3UHA3 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Spg11Q3UHA3 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Spg11Q3UHA3 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Spg11Q3UHA3 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Spg11Q3UHA3 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Spg11Q3UHA3 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Spg11Q3UHA3 Gm44443-201ENSMUST00000204396 5633 ntBASIC11.23□□□□□ -0.61
Spg11Q3UHA3 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Spg11Q3UHA3 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC11.23□□□□□ -0.61
Spg11Q3UHA3 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Spg11Q3UHA3 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Spg11Q3UHA3 Gm43249-201ENSMUST00000200464 458 ntBASIC11.23□□□□□ -0.61
Spg11Q3UHA3 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Spg11Q3UHA3 AC174797.2-201ENSMUST00000225835 165 ntBASIC11.23□□□□□ -0.61
Spg11Q3UHA3 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Spg11Q3UHA3 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Spg11Q3UHA3 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Spg11Q3UHA3 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Spg11Q3UHA3 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Spg11Q3UHA3 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Spg11Q3UHA3 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Spg11Q3UHA3 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Spg11Q3UHA3 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Spg11Q3UHA3 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC11.23□□□□□ -0.61
Spg11Q3UHA3 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Spg11Q3UHA3 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Spg11Q3UHA3 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Spg11Q3UHA3 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.23□□□□□ -0.61
Spg11Q3UHA3 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Spg11Q3UHA3 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Spg11Q3UHA3 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Spg11Q3UHA3 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Spg11Q3UHA3 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Spg11Q3UHA3 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Spg11Q3UHA3 Gm23132-201ENSMUST00000104254 132 ntBASIC11.23□□□□□ -0.61
Spg11Q3UHA3 Eif5a-212ENSMUST00000153652 840 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Spg11Q3UHA3 Mir8093-201ENSMUST00000185043 137 ntBASIC11.23□□□□□ -0.61
Spg11Q3UHA3 Gm8234-201ENSMUST00000198523 1107 ntBASIC11.23□□□□□ -0.61
Spg11Q3UHA3 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC11.23□□□□□ -0.61
Spg11Q3UHA3 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Spg11Q3UHA3 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC11.23□□□□□ -0.61
Spg11Q3UHA3 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Spg11Q3UHA3 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Spg11Q3UHA3 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Spg11Q3UHA3 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Spg11Q3UHA3 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Spg11Q3UHA3 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Spg11Q3UHA3 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Spg11Q3UHA3 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Spg11Q3UHA3 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Spg11Q3UHA3 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Spg11Q3UHA3 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Spg11Q3UHA3 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Spg11Q3UHA3 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Spg11Q3UHA3 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Spg11Q3UHA3 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Spg11Q3UHA3 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Spg11Q3UHA3 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Spg11Q3UHA3 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Spg11Q3UHA3 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Spg11Q3UHA3 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Spg11Q3UHA3 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Spg11Q3UHA3 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Spg11Q3UHA3 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Spg11Q3UHA3 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC11.22□□□□□ -0.61
Spg11Q3UHA3 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC11.22□□□□□ -0.61
Spg11Q3UHA3 CT025603.1-201ENSMUST00000224040 448 ntBASIC11.22□□□□□ -0.61
Spg11Q3UHA3 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Spg11Q3UHA3 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Spg11Q3UHA3 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Spg11Q3UHA3 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Spg11Q3UHA3 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.22□□□□□ -0.61
Spg11Q3UHA3 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Spg11Q3UHA3 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Spg11Q3UHA3 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Spg11Q3UHA3 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Spg11Q3UHA3 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Spg11Q3UHA3 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Spg11Q3UHA3 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.22□□□□□ -0.61
Spg11Q3UHA3 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms