Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Gm43244-201ENSMUST00000196994 1285 ntBASIC14.22□□□□□ -0.13
Rnf180Q3U827 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC14.22□□□□□ -0.13
Rnf180Q3U827 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC14.22□□□□□ -0.13
Rnf180Q3U827 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf180Q3U827 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Rnf180Q3U827 Gm6478-201ENSMUST00000099450 742 ntBASIC14.22□□□□□ -0.13
Rnf180Q3U827 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf180Q3U827 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf180Q3U827 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf180Q3U827 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf180Q3U827 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf180Q3U827 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf180Q3U827 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Rnf180Q3U827 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf180Q3U827 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf180Q3U827 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.22□□□□□ -0.13
Rnf180Q3U827 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf180Q3U827 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Rnf180Q3U827 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf180Q3U827 Gm14005-210ENSMUST00000225087 1413 ntBASIC14.22□□□□□ -0.13
Rnf180Q3U827 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf180Q3U827 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Rnf180Q3U827 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.22□□□□□ -0.13
Rnf180Q3U827 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf180Q3U827 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf180Q3U827 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf180Q3U827 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf180Q3U827 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC14.21□□□□□ -0.13
Rnf180Q3U827 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf180Q3U827 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Rnf180Q3U827 Gm8899-201ENSMUST00000214635 1332 ntBASIC14.21□□□□□ -0.13
Rnf180Q3U827 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf180Q3U827 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf180Q3U827 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf180Q3U827 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf180Q3U827 Gm14497-201ENSMUST00000119537 580 ntBASIC14.21□□□□□ -0.13
Rnf180Q3U827 Gm16210-201ENSMUST00000122161 610 ntBASIC14.21□□□□□ -0.13
Rnf180Q3U827 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Rnf180Q3U827 Zcwpw2-203ENSMUST00000187803 372 ntBASIC14.21□□□□□ -0.13
Rnf180Q3U827 Gm18010-201ENSMUST00000203553 202 ntBASIC14.21□□□□□ -0.13
Rnf180Q3U827 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Rnf180Q3U827 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC14.21□□□□□ -0.13
Rnf180Q3U827 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC14.21□□□□□ -0.13
Rnf180Q3U827 AC154433.1-201ENSMUST00000224401 1183 ntBASIC14.21□□□□□ -0.13
Rnf180Q3U827 CT010480.2-201ENSMUST00000225424 737 ntBASIC14.21□□□□□ -0.13
Rnf180Q3U827 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf180Q3U827 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Rnf180Q3U827 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf180Q3U827 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Rnf180Q3U827 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Rnf180Q3U827 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf180Q3U827 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf180Q3U827 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.21□□□□□ -0.13
Rnf180Q3U827 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rnf180Q3U827 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rnf180Q3U827 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rnf180Q3U827 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rnf180Q3U827 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rnf180Q3U827 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rnf180Q3U827 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rnf180Q3U827 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Rnf180Q3U827 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf180Q3U827 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf180Q3U827 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.2□□□□□ -0.14
Rnf180Q3U827 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC14.2□□□□□ -0.14
Rnf180Q3U827 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf180Q3U827 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rnf180Q3U827 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf180Q3U827 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rnf180Q3U827 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf180Q3U827 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Rnf180Q3U827 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf180Q3U827 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf180Q3U827 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Rnf180Q3U827 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf180Q3U827 Gm15626-201ENSMUST00000117478 868 ntBASIC14.2□□□□□ -0.14
Rnf180Q3U827 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC14.2□□□□□ -0.14
Rnf180Q3U827 Gm14006-201ENSMUST00000122132 981 ntBASIC14.2□□□□□ -0.14
Rnf180Q3U827 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf180Q3U827 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC14.2□□□□□ -0.14
Rnf180Q3U827 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC14.2□□□□□ -0.14
Rnf180Q3U827 C130080G10Rik-204ENSMUST00000155185 954 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf180Q3U827 Gm26313-201ENSMUST00000157770 308 ntBASIC14.2□□□□□ -0.14
Rnf180Q3U827 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Rnf180Q3U827 Gm8197-202ENSMUST00000193422 934 ntBASIC14.2□□□□□ -0.14
Rnf180Q3U827 Gm43249-201ENSMUST00000200464 458 ntBASIC14.2□□□□□ -0.14
Rnf180Q3U827 Gm8255-201ENSMUST00000218693 305 ntBASIC14.2□□□□□ -0.14
Rnf180Q3U827 AC102847.1-202ENSMUST00000226313 1245 ntBASIC14.2□□□□□ -0.14
Rnf180Q3U827 Mir341-201ENSMUST00000093593 96 ntBASIC14.2□□□□□ -0.14
Rnf180Q3U827 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf180Q3U827 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf180Q3U827 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf180Q3U827 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf180Q3U827 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC14.2□□□□□ -0.14
Rnf180Q3U827 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf180Q3U827 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf180Q3U827 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf180Q3U827 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf180Q3U827 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf180Q3U827 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms