Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC13.69□□□□□ -0.22
Pdlim7Q3TJD7 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Pdlim7Q3TJD7 Gm9139-201ENSMUST00000218817 700 ntBASIC13.69□□□□□ -0.22
Pdlim7Q3TJD7 CT025553.1-201ENSMUST00000226292 299 ntBASIC13.69□□□□□ -0.22
Pdlim7Q3TJD7 AC121960.1-201ENSMUST00000227982 564 ntBASIC13.69□□□□□ -0.22
Pdlim7Q3TJD7 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim7Q3TJD7 Gm8325-201ENSMUST00000099086 453 ntBASIC13.69□□□□□ -0.22
Pdlim7Q3TJD7 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC13.69□□□□□ -0.22
Pdlim7Q3TJD7 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim7Q3TJD7 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim7Q3TJD7 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim7Q3TJD7 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim7Q3TJD7 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Pdlim7Q3TJD7 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim7Q3TJD7 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Pdlim7Q3TJD7 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim7Q3TJD7 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 Gm22920-201ENSMUST00000102175 109 ntBASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 Gm12164-201ENSMUST00000121695 551 ntBASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 Gm44270-201ENSMUST00000203084 1234 ntBASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 Mir483-201ENSMUST00000093631 73 ntBASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim7Q3TJD7 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim7Q3TJD7 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Pdlim7Q3TJD7 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Pdlim7Q3TJD7 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim7Q3TJD7 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim7Q3TJD7 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Pdlim7Q3TJD7 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.67□□□□□ -0.22
Pdlim7Q3TJD7 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim7Q3TJD7 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.67□□□□□ -0.22
Pdlim7Q3TJD7 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Pdlim7Q3TJD7 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Pdlim7Q3TJD7 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim7Q3TJD7 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim7Q3TJD7 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim7Q3TJD7 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim7Q3TJD7 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Pdlim7Q3TJD7 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim7Q3TJD7 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim7Q3TJD7 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim7Q3TJD7 Gm26013-201ENSMUST00000104404 119 ntBASIC13.67□□□□□ -0.22
Pdlim7Q3TJD7 Gm12990-201ENSMUST00000120372 468 ntBASIC13.67□□□□□ -0.22
Pdlim7Q3TJD7 Gm14219-201ENSMUST00000120414 288 ntBASIC13.67□□□□□ -0.22
Pdlim7Q3TJD7 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Pdlim7Q3TJD7 Ighv5-11-201ENSMUST00000193354 371 ntBASIC13.67□□□□□ -0.22
Pdlim7Q3TJD7 Gm44158-201ENSMUST00000203881 505 ntBASIC13.67□□□□□ -0.22
Pdlim7Q3TJD7 CT485606.1-201ENSMUST00000213187 878 ntBASIC13.67□□□□□ -0.22
Pdlim7Q3TJD7 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC13.67□□□□□ -0.22
Pdlim7Q3TJD7 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC13.67□□□□□ -0.22
Pdlim7Q3TJD7 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim7Q3TJD7 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim7Q3TJD7 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Pdlim7Q3TJD7 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim7Q3TJD7 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms