Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trim63Q38HM4 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trim63Q38HM4 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim63Q38HM4 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim63Q38HM4 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim63Q38HM4 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim63Q38HM4 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trim63Q38HM4 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Rreb1-207ENSMUST00000128570 8436 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Trim63Q38HM4 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Lox-202ENSMUST00000171470 4468 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Gm16576-201ENSMUST00000128342 5404 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Atp2b2-202ENSMUST00000101044 4586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Gm11434-201ENSMUST00000122379 629 ntBASIC10.03□□□□□ -0.8
Trim63Q38HM4 Gm7284-201ENSMUST00000131667 944 ntBASIC10.03□□□□□ -0.8
Trim63Q38HM4 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Gm27357-201ENSMUST00000183754 135 ntBASIC10.03□□□□□ -0.8
Trim63Q38HM4 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC10.03□□□□□ -0.8
Trim63Q38HM4 Gm29245-201ENSMUST00000187332 1416 ntBASIC10.03□□□□□ -0.8
Trim63Q38HM4 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Gm44487-201ENSMUST00000205145 325 ntBASIC10.03□□□□□ -0.8
Trim63Q38HM4 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim63Q38HM4 AC154621.1-201ENSMUST00000226155 1119 ntBASIC10.03□□□□□ -0.8
Trim63Q38HM4 AC156016.3-201ENSMUST00000228623 344 ntBASIC10.03□□□□□ -0.8
Trim63Q38HM4 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Gm19327-201ENSMUST00000220651 3271 ntBASIC10.03□□□□□ -0.8
Trim63Q38HM4 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Flg2-201ENSMUST00000098884 7011 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim63Q38HM4 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Trim63Q38HM4 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trim63Q38HM4 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trim63Q38HM4 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trim63Q38HM4 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
Trim63Q38HM4 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trim63Q38HM4 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Trim63Q38HM4 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trim63Q38HM4 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Trim63Q38HM4 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC10.02□□□□□ -0.8
Trim63Q38HM4 Prdx6b-201ENSMUST00000057072 2885 ntAPPRIS P1 BASIC10.02□□□□□ -0.8
Trim63Q38HM4 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trim63Q38HM4 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC10.02□□□□□ -0.81
Trim63Q38HM4 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trim63Q38HM4 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trim63Q38HM4 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trim63Q38HM4 Gm13126-201ENSMUST00000117079 3063 ntBASIC10.02□□□□□ -0.81
Trim63Q38HM4 Ccdc186-202ENSMUST00000118592 6445 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Trim63Q38HM4 Aco2-201ENSMUST00000023116 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trim63Q38HM4 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trim63Q38HM4 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trim63Q38HM4 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Trim63Q38HM4 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trim63Q38HM4 Gm36991-201ENSMUST00000191800 648 ntBASIC10.02□□□□□ -0.81
Trim63Q38HM4 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trim63Q38HM4 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC10.02□□□□□ -0.81
Trim63Q38HM4 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC10.02□□□□□ -0.81
Trim63Q38HM4 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.81
Trim63Q38HM4 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trim63Q38HM4 AC159301.1-201ENSMUST00000225130 1182 ntBASIC10.02□□□□□ -0.81
Trim63Q38HM4 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trim63Q38HM4 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trim63Q38HM4 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms