Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chrna5Q2MKA5 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chrna5Q2MKA5 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Chrna5Q2MKA5 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chrna5Q2MKA5 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chrna5Q2MKA5 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chrna5Q2MKA5 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chrna5Q2MKA5 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.51□□□□□ -0.09
Chrna5Q2MKA5 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Chrna5Q2MKA5 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Chrna5Q2MKA5 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chrna5Q2MKA5 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chrna5Q2MKA5 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Chrna5Q2MKA5 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC14.51□□□□□ -0.09
Chrna5Q2MKA5 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chrna5Q2MKA5 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Chrna5Q2MKA5 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Chrna5Q2MKA5 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chrna5Q2MKA5 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chrna5Q2MKA5 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Chrna5Q2MKA5 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chrna5Q2MKA5 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC14.51□□□□□ -0.09
Chrna5Q2MKA5 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC14.51□□□□□ -0.09
Chrna5Q2MKA5 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC14.51□□□□□ -0.09
Chrna5Q2MKA5 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Chrna5Q2MKA5 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Chrna5Q2MKA5 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Chrna5Q2MKA5 Gm21092-201ENSMUST00000178995 955 ntBASIC14.51□□□□□ -0.09
Chrna5Q2MKA5 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Chrna5Q2MKA5 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC14.51□□□□□ -0.09
Chrna5Q2MKA5 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC14.51□□□□□ -0.09
Chrna5Q2MKA5 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC14.51□□□□□ -0.09
Chrna5Q2MKA5 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Chrna5Q2MKA5 Gm5537-201ENSMUST00000091117 1252 ntBASIC14.51□□□□□ -0.09
Chrna5Q2MKA5 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chrna5Q2MKA5 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chrna5Q2MKA5 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC14.51□□□□□ -0.09
Chrna5Q2MKA5 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chrna5Q2MKA5 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC14.51□□□□□ -0.09
Chrna5Q2MKA5 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Chrna5Q2MKA5 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Chrna5Q2MKA5 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chrna5Q2MKA5 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Chrna5Q2MKA5 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chrna5Q2MKA5 AC126257.1-201ENSMUST00000213195 1536 ntBASIC14.51□□□□□ -0.09
Chrna5Q2MKA5 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chrna5Q2MKA5 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chrna5Q2MKA5 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chrna5Q2MKA5 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chrna5Q2MKA5 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chrna5Q2MKA5 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chrna5Q2MKA5 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chrna5Q2MKA5 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC14.5□□□□□ -0.09
Chrna5Q2MKA5 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chrna5Q2MKA5 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chrna5Q2MKA5 Gm23912-201ENSMUST00000104687 87 ntBASIC14.5□□□□□ -0.09
Chrna5Q2MKA5 Gm22711-201ENSMUST00000116890 133 ntBASIC14.5□□□□□ -0.09
Chrna5Q2MKA5 Gm12969-201ENSMUST00000120199 1004 ntBASIC14.5□□□□□ -0.09
Chrna5Q2MKA5 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC14.5□□□□□ -0.09
Chrna5Q2MKA5 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Chrna5Q2MKA5 Gm8531-201ENSMUST00000188319 893 ntBASIC14.5□□□□□ -0.09
Chrna5Q2MKA5 Gm17877-201ENSMUST00000192578 814 ntBASIC14.5□□□□□ -0.09
Chrna5Q2MKA5 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Chrna5Q2MKA5 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC14.5□□□□□ -0.09
Chrna5Q2MKA5 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Chrna5Q2MKA5 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chrna5Q2MKA5 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chrna5Q2MKA5 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Chrna5Q2MKA5 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chrna5Q2MKA5 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Chrna5Q2MKA5 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Chrna5Q2MKA5 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Chrna5Q2MKA5 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chrna5Q2MKA5 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Chrna5Q2MKA5 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chrna5Q2MKA5 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.5□□□□□ -0.09
Chrna5Q2MKA5 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chrna5Q2MKA5 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chrna5Q2MKA5 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chrna5Q2MKA5 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Chrna5Q2MKA5 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chrna5Q2MKA5 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Chrna5Q2MKA5 Gm5385-201ENSMUST00000118988 1559 ntBASIC14.49□□□□□ -0.09
Chrna5Q2MKA5 Gm26013-201ENSMUST00000104404 119 ntBASIC14.49□□□□□ -0.09
Chrna5Q2MKA5 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Chrna5Q2MKA5 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chrna5Q2MKA5 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC14.49□□□□□ -0.09
Chrna5Q2MKA5 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Chrna5Q2MKA5 Gm29499-201ENSMUST00000189151 486 ntBASIC14.49□□□□□ -0.09
Chrna5Q2MKA5 Gm28329-201ENSMUST00000191208 689 ntBASIC14.49□□□□□ -0.09
Chrna5Q2MKA5 Gm29171-201ENSMUST00000191397 486 ntBASIC14.49□□□□□ -0.09
Chrna5Q2MKA5 Ighv5-11-201ENSMUST00000193354 371 ntBASIC14.49□□□□□ -0.09
Chrna5Q2MKA5 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Chrna5Q2MKA5 Gm18636-201ENSMUST00000218846 1066 ntBASIC14.49□□□□□ -0.09
Chrna5Q2MKA5 Gm9661-201ENSMUST00000221611 1122 ntBASIC14.49□□□□□ -0.09
Chrna5Q2MKA5 AC102368.1-201ENSMUST00000227161 892 ntBASIC14.49□□□□□ -0.09
Chrna5Q2MKA5 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chrna5Q2MKA5 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chrna5Q2MKA5 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Chrna5Q2MKA5 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms