Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col19a1Q0VF58 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Col19a1Q0VF58 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col19a1Q0VF58 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
Col19a1Q0VF58 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col19a1Q0VF58 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col19a1Q0VF58 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col19a1Q0VF58 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col19a1Q0VF58 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Col19a1Q0VF58 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col19a1Q0VF58 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Col19a1Q0VF58 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col19a1Q0VF58 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col19a1Q0VF58 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Col19a1Q0VF58 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col19a1Q0VF58 Gm23272-201ENSMUST00000104053 129 ntBASIC13□□□□□ -0.33
Col19a1Q0VF58 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Col19a1Q0VF58 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC13□□□□□ -0.33
Col19a1Q0VF58 Gm11560-201ENSMUST00000117567 948 ntBASIC13□□□□□ -0.33
Col19a1Q0VF58 Gm14034-201ENSMUST00000120147 551 ntBASIC13□□□□□ -0.33
Col19a1Q0VF58 Gm5555-201ENSMUST00000120352 1111 ntBASIC13□□□□□ -0.33
Col19a1Q0VF58 Gm14247-201ENSMUST00000120950 237 ntBASIC13□□□□□ -0.33
Col19a1Q0VF58 Gm7150-201ENSMUST00000122032 981 ntBASIC13□□□□□ -0.33
Col19a1Q0VF58 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col19a1Q0VF58 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Col19a1Q0VF58 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC13□□□□□ -0.33
Col19a1Q0VF58 Gm17070-201ENSMUST00000170463 784 ntBASIC13□□□□□ -0.33
Col19a1Q0VF58 Gm7985-201ENSMUST00000183329 981 ntBASIC13□□□□□ -0.33
Col19a1Q0VF58 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC13□□□□□ -0.33
Col19a1Q0VF58 Gm18801-201ENSMUST00000186616 536 ntBASIC13□□□□□ -0.33
Col19a1Q0VF58 Gm6855-201ENSMUST00000206307 790 ntBASIC13□□□□□ -0.33
Col19a1Q0VF58 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col19a1Q0VF58 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Col19a1Q0VF58 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC13□□□□□ -0.33
Col19a1Q0VF58 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col19a1Q0VF58 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Col19a1Q0VF58 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col19a1Q0VF58 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col19a1Q0VF58 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col19a1Q0VF58 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Col19a1Q0VF58 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col19a1Q0VF58 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13□□□□□ -0.33
Col19a1Q0VF58 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col19a1Q0VF58 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col19a1Q0VF58 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col19a1Q0VF58 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Col19a1Q0VF58 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col19a1Q0VF58 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.99□□□□□ -0.33
Col19a1Q0VF58 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.99□□□□□ -0.33
Col19a1Q0VF58 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col19a1Q0VF58 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.99□□□□□ -0.33
Col19a1Q0VF58 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Col19a1Q0VF58 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col19a1Q0VF58 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col19a1Q0VF58 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col19a1Q0VF58 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Col19a1Q0VF58 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col19a1Q0VF58 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.99□□□□□ -0.33
Col19a1Q0VF58 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col19a1Q0VF58 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col19a1Q0VF58 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col19a1Q0VF58 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col19a1Q0VF58 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Col19a1Q0VF58 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.99□□□□□ -0.33
Col19a1Q0VF58 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col19a1Q0VF58 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col19a1Q0VF58 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC12.99□□□□□ -0.33
Col19a1Q0VF58 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.99□□□□□ -0.33
Col19a1Q0VF58 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Col19a1Q0VF58 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col19a1Q0VF58 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col19a1Q0VF58 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.99□□□□□ -0.33
Col19a1Q0VF58 Gm42816-201ENSMUST00000198433 325 ntBASIC12.99□□□□□ -0.33
Col19a1Q0VF58 Gm43854-201ENSMUST00000200418 394 ntBASIC12.99□□□□□ -0.33
Col19a1Q0VF58 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col19a1Q0VF58 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC12.99□□□□□ -0.33
Col19a1Q0VF58 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.99□□□□□ -0.33
Col19a1Q0VF58 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC12.99□□□□□ -0.33
Col19a1Q0VF58 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col19a1Q0VF58 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col19a1Q0VF58 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.99□□□□□ -0.33
Col19a1Q0VF58 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Col19a1Q0VF58 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col19a1Q0VF58 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Col19a1Q0VF58 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col19a1Q0VF58 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col19a1Q0VF58 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col19a1Q0VF58 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col19a1Q0VF58 Gm6831-202ENSMUST00000213025 1673 ntBASIC12.99□□□□□ -0.33
Col19a1Q0VF58 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col19a1Q0VF58 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col19a1Q0VF58 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col19a1Q0VF58 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col19a1Q0VF58 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col19a1Q0VF58 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col19a1Q0VF58 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col19a1Q0VF58 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Col19a1Q0VF58 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col19a1Q0VF58 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Col19a1Q0VF58 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms