Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.46□□□□□ -0.41
Ebf1Q07802 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.46□□□□□ -0.41
Ebf1Q07802 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.46□□□□□ -0.41
Ebf1Q07802 Gm12314-201ENSMUST00000118104 538 ntBASIC12.46□□□□□ -0.41
Ebf1Q07802 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.46□□□□□ -0.41
Ebf1Q07802 Gm11597-201ENSMUST00000121423 964 ntBASIC12.46□□□□□ -0.41
Ebf1Q07802 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC12.46□□□□□ -0.41
Ebf1Q07802 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC12.46□□□□□ -0.41
Ebf1Q07802 Gm23699-201ENSMUST00000158835 135 ntBASIC12.46□□□□□ -0.41
Ebf1Q07802 Gm27627-201ENSMUST00000183644 150 ntBASIC12.46□□□□□ -0.41
Ebf1Q07802 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.46□□□□□ -0.41
Ebf1Q07802 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf1Q07802 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf1Q07802 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
Ebf1Q07802 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Ebf1Q07802 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.46□□□□□ -0.42
Ebf1Q07802 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ebf1Q07802 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ebf1Q07802 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Ebf1Q07802 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Ebf1Q07802 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf1Q07802 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf1Q07802 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf1Q07802 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf1Q07802 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf1Q07802 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf1Q07802 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf1Q07802 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf1Q07802 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf1Q07802 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf1Q07802 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf1Q07802 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf1Q07802 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf1Q07802 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Ebf1Q07802 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf1Q07802 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Ebf1Q07802 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf1Q07802 Gm13408-201ENSMUST00000119822 798 ntBASIC12.45□□□□□ -0.42
Ebf1Q07802 Gm13935-201ENSMUST00000121859 798 ntBASIC12.45□□□□□ -0.42
Ebf1Q07802 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf1Q07802 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.45□□□□□ -0.42
Ebf1Q07802 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf1Q07802 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.45□□□□□ -0.42
Ebf1Q07802 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.45□□□□□ -0.42
Ebf1Q07802 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.45□□□□□ -0.42
Ebf1Q07802 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf1Q07802 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Ebf1Q07802 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.45□□□□□ -0.42
Ebf1Q07802 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf1Q07802 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.45□□□□□ -0.42
Ebf1Q07802 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf1Q07802 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf1Q07802 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf1Q07802 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf1Q07802 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf1Q07802 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf1Q07802 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf1Q07802 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.45□□□□□ -0.42
Ebf1Q07802 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf1Q07802 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Ebf1Q07802 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf1Q07802 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf1Q07802 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf1Q07802 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf1Q07802 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.44□□□□□ -0.42
Ebf1Q07802 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Ebf1Q07802 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf1Q07802 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf1Q07802 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf1Q07802 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf1Q07802 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.44□□□□□ -0.42
Ebf1Q07802 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf1Q07802 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf1Q07802 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf1Q07802 Gm23949-201ENSMUST00000104027 127 ntBASIC12.44□□□□□ -0.42
Ebf1Q07802 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.44□□□□□ -0.42
Ebf1Q07802 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf1Q07802 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf1Q07802 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.44□□□□□ -0.42
Ebf1Q07802 Gm9230-201ENSMUST00000188228 532 ntBASIC12.44□□□□□ -0.42
Ebf1Q07802 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.44□□□□□ -0.42
Ebf1Q07802 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC12.44□□□□□ -0.42
Ebf1Q07802 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf1Q07802 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf1Q07802 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf1Q07802 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf1Q07802 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf1Q07802 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf1Q07802 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.44□□□□□ -0.42
Ebf1Q07802 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf1Q07802 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.44□□□□□ -0.42
Ebf1Q07802 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.44□□□□□ -0.42
Ebf1Q07802 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf1Q07802 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf1Q07802 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf1Q07802 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf1Q07802 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf1Q07802 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf1Q07802 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf1Q07802 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms