Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox4Q06831 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Sox4Q06831 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox4Q06831 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Sox4Q06831 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sox4Q06831 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox4Q06831 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Sox4Q06831 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox4Q06831 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Sox4Q06831 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox4Q06831 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Sox4Q06831 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox4Q06831 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox4Q06831 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox4Q06831 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox4Q06831 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox4Q06831 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox4Q06831 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox4Q06831 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox4Q06831 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox4Q06831 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Sox4Q06831 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Sox4Q06831 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox4Q06831 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox4Q06831 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Sox4Q06831 Gm13665-201ENSMUST00000120830 528 ntBASIC12.06□□□□□ -0.48
Sox4Q06831 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox4Q06831 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.06□□□□□ -0.48
Sox4Q06831 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox4Q06831 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox4Q06831 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox4Q06831 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.06□□□□□ -0.48
Sox4Q06831 Rprl1-202ENSMUST00000198476 238 ntBASIC12.06□□□□□ -0.48
Sox4Q06831 Gm44124-201ENSMUST00000204159 472 ntBASIC12.06□□□□□ -0.48
Sox4Q06831 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.06□□□□□ -0.48
Sox4Q06831 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox4Q06831 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Sox4Q06831 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox4Q06831 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox4Q06831 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.06□□□□□ -0.48
Sox4Q06831 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox4Q06831 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Sox4Q06831 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox4Q06831 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.06□□□□□ -0.48
Sox4Q06831 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.06□□□□□ -0.48
Sox4Q06831 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox4Q06831 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.06□□□□□ -0.48
Sox4Q06831 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Sox4Q06831 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.06□□□□□ -0.48
Sox4Q06831 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Sox4Q06831 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox4Q06831 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox4Q06831 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox4Q06831 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox4Q06831 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox4Q06831 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox4Q06831 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Sox4Q06831 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox4Q06831 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox4Q06831 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sox4Q06831 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox4Q06831 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox4Q06831 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox4Q06831 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.05□□□□□ -0.48
Sox4Q06831 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sox4Q06831 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Sox4Q06831 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox4Q06831 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox4Q06831 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sox4Q06831 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox4Q06831 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox4Q06831 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sox4Q06831 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sox4Q06831 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sox4Q06831 Gm26361-201ENSMUST00000158868 186 ntBASIC12.05□□□□□ -0.48
Sox4Q06831 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.05□□□□□ -0.48
Sox4Q06831 Gm9230-201ENSMUST00000188228 532 ntBASIC12.05□□□□□ -0.48
Sox4Q06831 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.05□□□□□ -0.48
Sox4Q06831 Gm44262-201ENSMUST00000204969 372 ntBASIC12.05□□□□□ -0.48
Sox4Q06831 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sox4Q06831 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.05□□□□□ -0.48
Sox4Q06831 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.05□□□□□ -0.48
Sox4Q06831 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox4Q06831 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Sox4Q06831 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Sox4Q06831 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox4Q06831 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox4Q06831 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox4Q06831 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sox4Q06831 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.05□□□□□ -0.48
Sox4Q06831 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Sox4Q06831 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Sox4Q06831 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.05□□□□□ -0.48
Sox4Q06831 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.05□□□□□ -0.48
Sox4Q06831 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox4Q06831 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Sox4Q06831 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox4Q06831 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.05□□□□□ -0.48
Sox4Q06831 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Sox4Q06831 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms