Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pfdn6Q03958 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pfdn6Q03958 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pfdn6Q03958 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pfdn6Q03958 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pfdn6Q03958 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pfdn6Q03958 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pfdn6Q03958 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pfdn6Q03958 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pfdn6Q03958 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pfdn6Q03958 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pfdn6Q03958 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pfdn6Q03958 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pfdn6Q03958 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pfdn6Q03958 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Pfdn6Q03958 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Pfdn6Q03958 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.34□□□□□ -0.43
Pfdn6Q03958 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pfdn6Q03958 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pfdn6Q03958 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pfdn6Q03958 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pfdn6Q03958 Gm27514-201ENSMUST00000183692 110 ntBASIC12.34□□□□□ -0.43
Pfdn6Q03958 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.34□□□□□ -0.43
Pfdn6Q03958 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.34□□□□□ -0.43
Pfdn6Q03958 Gm44882-201ENSMUST00000205702 802 ntBASIC12.34□□□□□ -0.43
Pfdn6Q03958 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Pfdn6Q03958 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pfdn6Q03958 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pfdn6Q03958 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Pfdn6Q03958 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pfdn6Q03958 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Pfdn6Q03958 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pfdn6Q03958 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pfdn6Q03958 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.34□□□□□ -0.43
Pfdn6Q03958 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pfdn6Q03958 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pfdn6Q03958 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pfdn6Q03958 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pfdn6Q03958 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pfdn6Q03958 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pfdn6Q03958 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Pfdn6Q03958 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pfdn6Q03958 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pfdn6Q03958 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pfdn6Q03958 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pfdn6Q03958 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Pfdn6Q03958 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.33□□□□□ -0.44
Pfdn6Q03958 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn6Q03958 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn6Q03958 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.33□□□□□ -0.44
Pfdn6Q03958 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.33□□□□□ -0.44
Pfdn6Q03958 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Pfdn6Q03958 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn6Q03958 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn6Q03958 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn6Q03958 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Pfdn6Q03958 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn6Q03958 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn6Q03958 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn6Q03958 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn6Q03958 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn6Q03958 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn6Q03958 Gm12058-201ENSMUST00000118614 437 ntBASIC12.33□□□□□ -0.44
Pfdn6Q03958 Gm13736-201ENSMUST00000119272 253 ntBASIC12.33□□□□□ -0.44
Pfdn6Q03958 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.33□□□□□ -0.44
Pfdn6Q03958 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Pfdn6Q03958 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.33□□□□□ -0.44
Pfdn6Q03958 Gm18304-201ENSMUST00000189162 546 ntBASIC12.33□□□□□ -0.44
Pfdn6Q03958 Gm37201-201ENSMUST00000191845 523 ntBASIC12.33□□□□□ -0.44
Pfdn6Q03958 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.33□□□□□ -0.44
Pfdn6Q03958 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.33□□□□□ -0.44
Pfdn6Q03958 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn6Q03958 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn6Q03958 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn6Q03958 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Pfdn6Q03958 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn6Q03958 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn6Q03958 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Pfdn6Q03958 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn6Q03958 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn6Q03958 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn6Q03958 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn6Q03958 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn6Q03958 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn6Q03958 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Pfdn6Q03958 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn6Q03958 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.33□□□□□ -0.44
Pfdn6Q03958 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn6Q03958 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn6Q03958 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn6Q03958 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn6Q03958 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfdn6Q03958 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC12.33□□□□□ -0.44
Pfdn6Q03958 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC12.32□□□□□ -0.44
Pfdn6Q03958 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn6Q03958 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Pfdn6Q03958 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Pfdn6Q03958 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.32□□□□□ -0.44
Pfdn6Q03958 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Pfdn6Q03958 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms