Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx3-2P97503 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx3-2P97503 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx3-2P97503 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Nkx3-2P97503 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Nkx3-2P97503 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx3-2P97503 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.63□□□□□ -0.55
Nkx3-2P97503 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx3-2P97503 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx3-2P97503 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx3-2P97503 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Nkx3-2P97503 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx3-2P97503 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Nkx3-2P97503 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.63□□□□□ -0.55
Nkx3-2P97503 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Nkx3-2P97503 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx3-2P97503 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Nkx3-2P97503 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.63□□□□□ -0.55
Nkx3-2P97503 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.63□□□□□ -0.55
Nkx3-2P97503 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx3-2P97503 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx3-2P97503 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.63□□□□□ -0.55
Nkx3-2P97503 Rn7s1-201ENSMUST00000174924 300 ntBASIC11.63□□□□□ -0.55
Nkx3-2P97503 Rn7s2-201ENSMUST00000175032 300 ntBASIC11.63□□□□□ -0.55
Nkx3-2P97503 Gm26461-201ENSMUST00000175064 290 ntBASIC11.63□□□□□ -0.55
Nkx3-2P97503 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx3-2P97503 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.63□□□□□ -0.55
Nkx3-2P97503 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Nkx3-2P97503 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.63□□□□□ -0.55
Nkx3-2P97503 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx3-2P97503 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx3-2P97503 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx3-2P97503 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx3-2P97503 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Nkx3-2P97503 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.63□□□□□ -0.55
Nkx3-2P97503 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx3-2P97503 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx3-2P97503 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx3-2P97503 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.63□□□□□ -0.55
Nkx3-2P97503 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx3-2P97503 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx3-2P97503 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx3-2P97503 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx3-2P97503 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx3-2P97503 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx3-2P97503 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx3-2P97503 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.62□□□□□ -0.55
Nkx3-2P97503 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx3-2P97503 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Nkx3-2P97503 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx3-2P97503 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx3-2P97503 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Nkx3-2P97503 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Nkx3-2P97503 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx3-2P97503 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.62□□□□□ -0.55
Nkx3-2P97503 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.62□□□□□ -0.55
Nkx3-2P97503 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx3-2P97503 Gm24845-201ENSMUST00000158034 109 ntBASIC11.62□□□□□ -0.55
Nkx3-2P97503 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx3-2P97503 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.62□□□□□ -0.55
Nkx3-2P97503 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Nkx3-2P97503 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.62□□□□□ -0.55
Nkx3-2P97503 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Nkx3-2P97503 Gm28882-201ENSMUST00000185504 314 ntBASIC11.62□□□□□ -0.55
Nkx3-2P97503 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx3-2P97503 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC11.62□□□□□ -0.55
Nkx3-2P97503 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx3-2P97503 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx3-2P97503 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.62□□□□□ -0.55
Nkx3-2P97503 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx3-2P97503 Gm10312-201ENSMUST00000078515 489 ntBASIC11.62□□□□□ -0.55
Nkx3-2P97503 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.62□□□□□ -0.55
Nkx3-2P97503 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.62□□□□□ -0.55
Nkx3-2P97503 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx3-2P97503 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Nkx3-2P97503 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.62□□□□□ -0.55
Nkx3-2P97503 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx3-2P97503 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Nkx3-2P97503 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx3-2P97503 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx3-2P97503 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx3-2P97503 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx3-2P97503 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx3-2P97503 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx3-2P97503 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.62□□□□□ -0.55
Nkx3-2P97503 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx3-2P97503 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx3-2P97503 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx3-2P97503 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx3-2P97503 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx3-2P97503 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx3-2P97503 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-2P97503 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-2P97503 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-2P97503 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.61□□□□□ -0.55
Nkx3-2P97503 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-2P97503 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Nkx3-2P97503 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-2P97503 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Nkx3-2P97503 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms