Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcc1P97496 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Smarcc1P97496 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Smarcc1P97496 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Smarcc1P97496 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Smarcc1P97496 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC15.33■□□□□ 0.05
Smarcc1P97496 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Smarcc1P97496 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Smarcc1P97496 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC15.33■□□□□ 0.04
Smarcc1P97496 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcc1P97496 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcc1P97496 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Smarcc1P97496 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC15.33■□□□□ 0.04
Smarcc1P97496 Gm16071-201ENSMUST00000119589 793 ntBASIC15.33■□□□□ 0.04
Smarcc1P97496 Gm14760-201ENSMUST00000121831 999 ntBASIC15.33■□□□□ 0.04
Smarcc1P97496 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcc1P97496 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcc1P97496 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC15.33■□□□□ 0.04
Smarcc1P97496 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcc1P97496 Gm17826-201ENSMUST00000189720 798 ntBASIC15.33■□□□□ 0.04
Smarcc1P97496 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC15.33■□□□□ 0.04
Smarcc1P97496 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC15.33■□□□□ 0.04
Smarcc1P97496 Gm42518-201ENSMUST00000196277 938 ntBASIC15.33■□□□□ 0.04
Smarcc1P97496 Gm9645-201ENSMUST00000197131 792 ntBASIC15.33■□□□□ 0.04
Smarcc1P97496 Gm43186-201ENSMUST00000198130 824 ntBASIC15.33■□□□□ 0.04
Smarcc1P97496 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcc1P97496 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcc1P97496 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcc1P97496 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcc1P97496 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC15.33■□□□□ 0.04
Smarcc1P97496 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcc1P97496 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcc1P97496 Gm38346-201ENSMUST00000192379 2639 ntBASIC15.33■□□□□ 0.04
Smarcc1P97496 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcc1P97496 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Smarcc1P97496 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcc1P97496 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcc1P97496 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcc1P97496 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
Smarcc1P97496 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcc1P97496 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcc1P97496 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC15.33■□□□□ 0.04
Smarcc1P97496 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcc1P97496 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcc1P97496 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Smarcc1P97496 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcc1P97496 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcc1P97496 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcc1P97496 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcc1P97496 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcc1P97496 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcc1P97496 AC173482.6-201ENSMUST00000225889 1741 ntBASIC15.32■□□□□ 0.04
Smarcc1P97496 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC15.32■□□□□ 0.04
Smarcc1P97496 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcc1P97496 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcc1P97496 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Smarcc1P97496 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC15.32■□□□□ 0.04
Smarcc1P97496 Gm12164-201ENSMUST00000121695 551 ntBASIC15.32■□□□□ 0.04
Smarcc1P97496 Gm8737-201ENSMUST00000122208 642 ntBASIC15.32■□□□□ 0.04
Smarcc1P97496 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC15.32■□□□□ 0.04
Smarcc1P97496 Gm23045-201ENSMUST00000175041 96 ntBASIC15.32■□□□□ 0.04
Smarcc1P97496 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC15.32■□□□□ 0.04
Smarcc1P97496 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC15.32■□□□□ 0.04
Smarcc1P97496 Gm44329-201ENSMUST00000197469 112 ntBASIC15.32■□□□□ 0.04
Smarcc1P97496 Gm43520-201ENSMUST00000197996 164 ntBASIC15.32■□□□□ 0.04
Smarcc1P97496 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcc1P97496 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcc1P97496 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcc1P97496 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcc1P97496 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcc1P97496 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Smarcc1P97496 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC15.32■□□□□ 0.04
Smarcc1P97496 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcc1P97496 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcc1P97496 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
Smarcc1P97496 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc1P97496 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Smarcc1P97496 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc1P97496 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc1P97496 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc1P97496 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc1P97496 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc1P97496 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc1P97496 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc1P97496 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Smarcc1P97496 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc1P97496 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Smarcc1P97496 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Smarcc1P97496 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc1P97496 Gm4879-201ENSMUST00000122190 1272 ntBASIC15.31■□□□□ 0.04
Smarcc1P97496 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc1P97496 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc1P97496 Mir1956-201ENSMUST00000157748 65 ntBASIC15.31■□□□□ 0.04
Smarcc1P97496 Gm10731-201ENSMUST00000181171 448 ntBASIC15.31■□□□□ 0.04
Smarcc1P97496 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Smarcc1P97496 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc1P97496 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc1P97496 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc1P97496 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc1P97496 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms