Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43bP86448 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43bP86448 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43bP86448 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43bP86448 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43bP86448 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43bP86448 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43bP86448 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43bP86448 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43bP86448 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim43bP86448 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trim43bP86448 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43bP86448 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43bP86448 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43bP86448 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43bP86448 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43bP86448 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43bP86448 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim43bP86448 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.63□□□□□ -0.39
Trim43bP86448 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.63□□□□□ -0.39
Trim43bP86448 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.63□□□□□ -0.39
Trim43bP86448 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.63□□□□□ -0.39
Trim43bP86448 Gm45880-201ENSMUST00000213041 853 ntBASIC12.63□□□□□ -0.39
Trim43bP86448 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43bP86448 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.63□□□□□ -0.39
Trim43bP86448 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.63□□□□□ -0.39
Trim43bP86448 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.63□□□□□ -0.39
Trim43bP86448 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43bP86448 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43bP86448 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43bP86448 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43bP86448 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43bP86448 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43bP86448 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Trim43bP86448 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.63□□□□□ -0.39
Trim43bP86448 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43bP86448 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.63□□□□□ -0.39
Trim43bP86448 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43bP86448 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43bP86448 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Trim43bP86448 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trim43bP86448 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trim43bP86448 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43bP86448 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43bP86448 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43bP86448 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.62□□□□□ -0.39
Trim43bP86448 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.62□□□□□ -0.39
Trim43bP86448 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trim43bP86448 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.62□□□□□ -0.39
Trim43bP86448 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43bP86448 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43bP86448 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trim43bP86448 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43bP86448 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43bP86448 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43bP86448 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trim43bP86448 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43bP86448 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim43bP86448 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trim43bP86448 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trim43bP86448 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.62□□□□□ -0.39
Trim43bP86448 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.62□□□□□ -0.39
Trim43bP86448 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.62□□□□□ -0.39
Trim43bP86448 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43bP86448 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.62□□□□□ -0.39
Trim43bP86448 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim43bP86448 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trim43bP86448 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43bP86448 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43bP86448 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim43bP86448 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43bP86448 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43bP86448 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43bP86448 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43bP86448 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim43bP86448 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trim43bP86448 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.62□□□□□ -0.39
Trim43bP86448 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43bP86448 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43bP86448 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trim43bP86448 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Trim43bP86448 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim43bP86448 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43bP86448 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43bP86448 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43bP86448 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43bP86448 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43bP86448 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43bP86448 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43bP86448 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43bP86448 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43bP86448 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43bP86448 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trim43bP86448 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43bP86448 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trim43bP86448 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim43bP86448 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43bP86448 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43bP86448 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Trim43bP86448 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms