Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcdP82347 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SgcdP82347 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcdP82347 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcdP82347 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcdP82347 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SgcdP82347 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
SgcdP82347 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcdP82347 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SgcdP82347 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcdP82347 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
SgcdP82347 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcdP82347 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcdP82347 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcdP82347 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SgcdP82347 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.42□□□□□ -0.58
SgcdP82347 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SgcdP82347 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
SgcdP82347 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SgcdP82347 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
SgcdP82347 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
SgcdP82347 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SgcdP82347 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SgcdP82347 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
SgcdP82347 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
SgcdP82347 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SgcdP82347 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
SgcdP82347 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SgcdP82347 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SgcdP82347 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SgcdP82347 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.42□□□□□ -0.58
SgcdP82347 Gm15198-201ENSMUST00000117283 177 ntBASIC11.42□□□□□ -0.58
SgcdP82347 Gm14660-201ENSMUST00000119809 575 ntBASIC11.42□□□□□ -0.58
SgcdP82347 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.42□□□□□ -0.58
SgcdP82347 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.42□□□□□ -0.58
SgcdP82347 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SgcdP82347 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.42□□□□□ -0.58
SgcdP82347 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
SgcdP82347 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
SgcdP82347 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
SgcdP82347 Gm8652-201ENSMUST00000181363 964 ntBASIC11.42□□□□□ -0.58
SgcdP82347 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.42□□□□□ -0.58
SgcdP82347 Gm43179-201ENSMUST00000198797 275 ntBASIC11.42□□□□□ -0.58
SgcdP82347 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SgcdP82347 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
SgcdP82347 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.42□□□□□ -0.58
SgcdP82347 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.42□□□□□ -0.58
SgcdP82347 Gm6091-201ENSMUST00000098307 165 ntBASIC11.42□□□□□ -0.58
SgcdP82347 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SgcdP82347 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SgcdP82347 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SgcdP82347 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SgcdP82347 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
SgcdP82347 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
SgcdP82347 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.42□□□□□ -0.58
SgcdP82347 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SgcdP82347 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
SgcdP82347 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
SgcdP82347 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.42□□□□□ -0.58
SgcdP82347 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SgcdP82347 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.41□□□□□ -0.58
SgcdP82347 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcdP82347 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcdP82347 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.41□□□□□ -0.58
SgcdP82347 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcdP82347 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SgcdP82347 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SgcdP82347 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.41□□□□□ -0.58
SgcdP82347 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SgcdP82347 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcdP82347 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SgcdP82347 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcdP82347 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcdP82347 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SgcdP82347 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcdP82347 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcdP82347 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.41□□□□□ -0.58
SgcdP82347 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
SgcdP82347 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
SgcdP82347 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SgcdP82347 Gm38671-201ENSMUST00000200573 130 ntBASIC11.41□□□□□ -0.58
SgcdP82347 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.41□□□□□ -0.58
SgcdP82347 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcdP82347 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.41□□□□□ -0.58
SgcdP82347 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcdP82347 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcdP82347 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcdP82347 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcdP82347 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcdP82347 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcdP82347 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SgcdP82347 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcdP82347 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
SgcdP82347 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcdP82347 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcdP82347 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
SgcdP82347 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SgcdP82347 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
SgcdP82347 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcdP82347 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms