Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CiitaP79621 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CiitaP79621 Gm12266-201ENSMUST00000120311 962 ntBASIC13.28□□□□□ -0.28
CiitaP79621 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.28□□□□□ -0.28
CiitaP79621 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC13.28□□□□□ -0.28
CiitaP79621 Gm4034-201ENSMUST00000187674 480 ntBASIC13.28□□□□□ -0.28
CiitaP79621 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CiitaP79621 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13.28□□□□□ -0.28
CiitaP79621 Gm18730-201ENSMUST00000218038 343 ntBASIC13.28□□□□□ -0.28
CiitaP79621 Gm270-201ENSMUST00000223010 976 ntBASIC13.28□□□□□ -0.28
CiitaP79621 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CiitaP79621 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CiitaP79621 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CiitaP79621 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CiitaP79621 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CiitaP79621 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CiitaP79621 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CiitaP79621 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.28□□□□□ -0.28
CiitaP79621 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.28□□□□□ -0.28
CiitaP79621 Gm37131-201ENSMUST00000192502 1561 ntBASIC13.28□□□□□ -0.28
CiitaP79621 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CiitaP79621 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CiitaP79621 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CiitaP79621 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.28□□□□□ -0.28
CiitaP79621 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CiitaP79621 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CiitaP79621 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CiitaP79621 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CiitaP79621 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CiitaP79621 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CiitaP79621 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.28
CiitaP79621 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CiitaP79621 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CiitaP79621 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CiitaP79621 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CiitaP79621 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CiitaP79621 Gm26286-201ENSMUST00000104166 134 ntBASIC13.27□□□□□ -0.29
CiitaP79621 Gm11511-201ENSMUST00000118146 540 ntBASIC13.27□□□□□ -0.29
CiitaP79621 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC13.27□□□□□ -0.29
CiitaP79621 Gm6039-201ENSMUST00000121667 1250 ntBASIC13.27□□□□□ -0.29
CiitaP79621 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC13.27□□□□□ -0.29
CiitaP79621 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC13.27□□□□□ -0.29
CiitaP79621 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CiitaP79621 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CiitaP79621 Gm28071-201ENSMUST00000190355 478 ntBASIC13.27□□□□□ -0.29
CiitaP79621 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC13.27□□□□□ -0.29
CiitaP79621 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CiitaP79621 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC13.27□□□□□ -0.29
CiitaP79621 CT571245.2-201ENSMUST00000218421 305 ntBASIC13.27□□□□□ -0.29
CiitaP79621 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CiitaP79621 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CiitaP79621 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.27□□□□□ -0.29
CiitaP79621 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CiitaP79621 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
CiitaP79621 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC13.27□□□□□ -0.29
CiitaP79621 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CiitaP79621 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CiitaP79621 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CiitaP79621 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CiitaP79621 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CiitaP79621 Gm28719-201ENSMUST00000187779 1757 ntBASIC13.27□□□□□ -0.29
CiitaP79621 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CiitaP79621 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CiitaP79621 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.27□□□□□ -0.29
CiitaP79621 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CiitaP79621 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CiitaP79621 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CiitaP79621 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CiitaP79621 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CiitaP79621 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CiitaP79621 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CiitaP79621 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CiitaP79621 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CiitaP79621 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
CiitaP79621 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CiitaP79621 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CiitaP79621 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC13.26□□□□□ -0.29
CiitaP79621 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC13.26□□□□□ -0.29
CiitaP79621 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC13.26□□□□□ -0.29
CiitaP79621 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CiitaP79621 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC13.26□□□□□ -0.29
CiitaP79621 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CiitaP79621 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CiitaP79621 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CiitaP79621 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC13.26□□□□□ -0.29
CiitaP79621 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC13.26□□□□□ -0.29
CiitaP79621 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CiitaP79621 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC13.26□□□□□ -0.29
CiitaP79621 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC13.26□□□□□ -0.29
CiitaP79621 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
CiitaP79621 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CiitaP79621 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.26□□□□□ -0.29
CiitaP79621 Gm18038-201ENSMUST00000197900 485 ntBASIC13.26□□□□□ -0.29
CiitaP79621 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CiitaP79621 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CiitaP79621 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC13.26□□□□□ -0.29
CiitaP79621 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CiitaP79621 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CiitaP79621 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC13.26□□□□□ -0.29
CiitaP79621 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms