Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Shox2P70390 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shox2P70390 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shox2P70390 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shox2P70390 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shox2P70390 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Shox2P70390 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Shox2P70390 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shox2P70390 Gm37954-201ENSMUST00000195400 2071 ntBASIC12.09□□□□□ -0.47
Shox2P70390 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shox2P70390 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.09□□□□□ -0.47
Shox2P70390 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shox2P70390 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shox2P70390 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Shox2P70390 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Shox2P70390 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Shox2P70390 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shox2P70390 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Shox2P70390 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Shox2P70390 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shox2P70390 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shox2P70390 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shox2P70390 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Shox2P70390 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shox2P70390 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shox2P70390 Gm14701-201ENSMUST00000117156 348 ntBASIC12.08□□□□□ -0.48
Shox2P70390 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shox2P70390 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Shox2P70390 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Shox2P70390 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Shox2P70390 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Shox2P70390 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Shox2P70390 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.08□□□□□ -0.48
Shox2P70390 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shox2P70390 Gm9797-201ENSMUST00000052902 613 ntBASIC12.08□□□□□ -0.48
Shox2P70390 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Shox2P70390 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Shox2P70390 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shox2P70390 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Shox2P70390 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Shox2P70390 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shox2P70390 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Shox2P70390 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.08□□□□□ -0.48
Shox2P70390 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shox2P70390 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shox2P70390 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shox2P70390 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shox2P70390 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shox2P70390 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shox2P70390 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.07□□□□□ -0.48
Shox2P70390 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shox2P70390 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shox2P70390 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC12.07□□□□□ -0.48
Shox2P70390 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shox2P70390 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shox2P70390 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shox2P70390 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Shox2P70390 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Shox2P70390 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Shox2P70390 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Shox2P70390 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.07□□□□□ -0.48
Shox2P70390 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Shox2P70390 Gm11964-201ENSMUST00000120982 444 ntBASIC12.07□□□□□ -0.48
Shox2P70390 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.07□□□□□ -0.48
Shox2P70390 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shox2P70390 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Shox2P70390 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.07□□□□□ -0.48
Shox2P70390 Gm27331-201ENSMUST00000183705 60 ntBASIC12.07□□□□□ -0.48
Shox2P70390 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Shox2P70390 Gm5264-201ENSMUST00000190584 848 ntBASIC12.07□□□□□ -0.48
Shox2P70390 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Shox2P70390 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Shox2P70390 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Shox2P70390 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shox2P70390 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shox2P70390 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Shox2P70390 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shox2P70390 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.07□□□□□ -0.48
Shox2P70390 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Shox2P70390 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Shox2P70390 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shox2P70390 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shox2P70390 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Shox2P70390 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.07□□□□□ -0.48
Shox2P70390 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shox2P70390 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shox2P70390 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shox2P70390 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shox2P70390 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shox2P70390 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shox2P70390 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shox2P70390 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shox2P70390 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.06□□□□□ -0.48
Shox2P70390 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shox2P70390 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shox2P70390 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shox2P70390 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shox2P70390 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.06□□□□□ -0.48
Shox2P70390 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Shox2P70390 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms