Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.6□□□□□ -0.39
Msx3P70354 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Msx3P70354 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Msx3P70354 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Msx3P70354 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Msx3P70354 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Msx3P70354 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.6□□□□□ -0.39
Msx3P70354 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Msx3P70354 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Msx3P70354 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Msx3P70354 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Msx3P70354 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Msx3P70354 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msx3P70354 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msx3P70354 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msx3P70354 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msx3P70354 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.59□□□□□ -0.39
Msx3P70354 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Msx3P70354 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msx3P70354 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Msx3P70354 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msx3P70354 Map1b-203ENSMUST00000223725 2669 ntBASIC12.59□□□□□ -0.39
Msx3P70354 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msx3P70354 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Msx3P70354 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.59□□□□□ -0.39
Msx3P70354 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Msx3P70354 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msx3P70354 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msx3P70354 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msx3P70354 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Msx3P70354 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msx3P70354 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msx3P70354 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msx3P70354 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Msx3P70354 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msx3P70354 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Msx3P70354 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.59□□□□□ -0.39
Msx3P70354 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Msx3P70354 Gm25043-201ENSMUST00000158604 212 ntBASIC12.59□□□□□ -0.39
Msx3P70354 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Msx3P70354 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Msx3P70354 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.59□□□□□ -0.39
Msx3P70354 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.59□□□□□ -0.39
Msx3P70354 Gm18062-201ENSMUST00000208020 547 ntBASIC12.59□□□□□ -0.39
Msx3P70354 Gm18055-201ENSMUST00000208254 547 ntBASIC12.59□□□□□ -0.39
Msx3P70354 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.59□□□□□ -0.39
Msx3P70354 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msx3P70354 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.59□□□□□ -0.39
Msx3P70354 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msx3P70354 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msx3P70354 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Msx3P70354 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msx3P70354 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msx3P70354 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msx3P70354 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msx3P70354 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msx3P70354 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Msx3P70354 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.59□□□□□ -0.39
Msx3P70354 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msx3P70354 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msx3P70354 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msx3P70354 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msx3P70354 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.59□□□□□ -0.39
Msx3P70354 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Msx3P70354 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Msx3P70354 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Msx3P70354 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.39
Msx3P70354 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.39
Msx3P70354 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.39
Msx3P70354 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Msx3P70354 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Msx3P70354 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msx3P70354 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msx3P70354 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msx3P70354 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.58□□□□□ -0.4
Msx3P70354 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.58□□□□□ -0.4
Msx3P70354 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.58□□□□□ -0.4
Msx3P70354 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Msx3P70354 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.58□□□□□ -0.4
Msx3P70354 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.58□□□□□ -0.4
Msx3P70354 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msx3P70354 Gm37424-201ENSMUST00000191727 561 ntBASIC12.58□□□□□ -0.4
Msx3P70354 Gm38158-201ENSMUST00000194617 339 ntBASIC12.58□□□□□ -0.4
Msx3P70354 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.58□□□□□ -0.4
Msx3P70354 Gm42627-201ENSMUST00000197347 224 ntBASIC12.58□□□□□ -0.4
Msx3P70354 Gm18711-201ENSMUST00000199341 750 ntBASIC12.58□□□□□ -0.4
Msx3P70354 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Msx3P70354 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msx3P70354 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msx3P70354 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msx3P70354 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Msx3P70354 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msx3P70354 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Msx3P70354 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Msx3P70354 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Msx3P70354 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msx3P70354 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msx3P70354 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msx3P70354 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Msx3P70354 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms