Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.49□□□□□ -0.57
Six5P70178 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Six5P70178 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.49□□□□□ -0.57
Six5P70178 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Six5P70178 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.49□□□□□ -0.57
Six5P70178 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Six5P70178 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
Six5P70178 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Six5P70178 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Six5P70178 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Six5P70178 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Six5P70178 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Six5P70178 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.49□□□□□ -0.57
Six5P70178 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Six5P70178 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Six5P70178 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Six5P70178 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.48□□□□□ -0.57
Six5P70178 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Six5P70178 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Six5P70178 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Six5P70178 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Six5P70178 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Six5P70178 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Six5P70178 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.48□□□□□ -0.57
Six5P70178 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Six5P70178 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.48□□□□□ -0.57
Six5P70178 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.48□□□□□ -0.57
Six5P70178 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Six5P70178 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
Six5P70178 Gm2991-201ENSMUST00000173338 480 ntBASIC11.48□□□□□ -0.57
Six5P70178 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.48□□□□□ -0.57
Six5P70178 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.48□□□□□ -0.57
Six5P70178 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.48□□□□□ -0.57
Six5P70178 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.48□□□□□ -0.57
Six5P70178 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Six5P70178 Gm3961-201ENSMUST00000204425 994 ntBASIC11.48□□□□□ -0.57
Six5P70178 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.48□□□□□ -0.57
Six5P70178 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Six5P70178 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Six5P70178 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Six5P70178 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Six5P70178 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.48□□□□□ -0.57
Six5P70178 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Six5P70178 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Six5P70178 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Six5P70178 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Six5P70178 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Six5P70178 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Six5P70178 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Six5P70178 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Six5P70178 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.48□□□□□ -0.57
Six5P70178 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Six5P70178 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Six5P70178 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Six5P70178 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Six5P70178 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Six5P70178 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.48□□□□□ -0.57
Six5P70178 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Six5P70178 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Six5P70178 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Six5P70178 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six5P70178 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six5P70178 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six5P70178 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six5P70178 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six5P70178 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Six5P70178 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six5P70178 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six5P70178 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.47□□□□□ -0.57
Six5P70178 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six5P70178 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Six5P70178 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Six5P70178 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six5P70178 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Six5P70178 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.47□□□□□ -0.57
Six5P70178 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six5P70178 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.47□□□□□ -0.57
Six5P70178 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six5P70178 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.47□□□□□ -0.57
Six5P70178 Gm15547-201ENSMUST00000122152 333 ntBASIC11.47□□□□□ -0.57
Six5P70178 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.47□□□□□ -0.57
Six5P70178 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.47□□□□□ -0.57
Six5P70178 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Six5P70178 Gm18711-201ENSMUST00000199341 750 ntBASIC11.47□□□□□ -0.57
Six5P70178 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.47□□□□□ -0.57
Six5P70178 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.47□□□□□ -0.57
Six5P70178 Gm9996-201ENSMUST00000070359 913 ntBASIC11.47□□□□□ -0.57
Six5P70178 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.47□□□□□ -0.57
Six5P70178 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six5P70178 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six5P70178 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six5P70178 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six5P70178 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six5P70178 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Six5P70178 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six5P70178 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six5P70178 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six5P70178 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six5P70178 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Six5P70178 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms