Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cks1bP61025 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC8.79□□□□□ -1
Cks1bP61025 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC8.79□□□□□ -1
Cks1bP61025 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Cks1bP61025 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cks1bP61025 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Cks1bP61025 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cks1bP61025 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cks1bP61025 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cks1bP61025 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cks1bP61025 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cks1bP61025 Gm28693-201ENSMUST00000189622 2638 ntBASIC8.79□□□□□ -1
Cks1bP61025 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cks1bP61025 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cks1bP61025 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cks1bP61025 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Cks1bP61025 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cks1bP61025 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Cks1bP61025 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cks1bP61025 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cks1bP61025 Tmprss7-201ENSMUST00000114562 2587 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cks1bP61025 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cks1bP61025 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cks1bP61025 AC115891.3-201ENSMUST00000219161 2472 ntBASIC8.78□□□□□ -1
Cks1bP61025 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cks1bP61025 Gm13126-201ENSMUST00000117079 3063 ntBASIC8.78□□□□□ -1
Cks1bP61025 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC8.78□□□□□ -1
Cks1bP61025 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC8.78□□□□□ -1
Cks1bP61025 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC8.78□□□□□ -1
Cks1bP61025 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC8.78□□□□□ -1
Cks1bP61025 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC8.78□□□□□ -1
Cks1bP61025 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC8.78□□□□□ -1
Cks1bP61025 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC8.78□□□□□ -1
Cks1bP61025 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cks1bP61025 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cks1bP61025 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC8.78□□□□□ -1
Cks1bP61025 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC8.78□□□□□ -1
Cks1bP61025 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC8.78□□□□□ -1
Cks1bP61025 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC8.78□□□□□ -1
Cks1bP61025 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Cks1bP61025 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cks1bP61025 Cd63-ps-201ENSMUST00000145417 875 ntBASIC8.78□□□□□ -1
Cks1bP61025 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC8.78□□□□□ -1
Cks1bP61025 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC8.78□□□□□ -1
Cks1bP61025 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cks1bP61025 AC151286.1-201ENSMUST00000198489 145 ntBASIC8.78□□□□□ -1
Cks1bP61025 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC8.78□□□□□ -1
Cks1bP61025 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC8.78□□□□□ -1
Cks1bP61025 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cks1bP61025 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC8.78□□□□□ -1
Cks1bP61025 Gm5161-201ENSMUST00000075243 853 ntBASIC8.78□□□□□ -1
Cks1bP61025 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cks1bP61025 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cks1bP61025 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Cks1bP61025 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC8.78□□□□□ -1
Cks1bP61025 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC8.78□□□□□ -1
Cks1bP61025 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cks1bP61025 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC8.78□□□□□ -1
Cks1bP61025 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC8.78□□□□□ -1
Cks1bP61025 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Cks1bP61025 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC8.78□□□□□ -1
Cks1bP61025 Gm21115-201ENSMUST00000187565 2578 ntBASIC8.78□□□□□ -1
Cks1bP61025 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC8.78□□□□□ -1
Cks1bP61025 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC8.78□□□□□ -1
Cks1bP61025 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC8.78□□□□□ -1
Cks1bP61025 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cks1bP61025 Gm10417-201ENSMUST00000194341 3522 ntBASIC8.78□□□□□ -1
Cks1bP61025 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC8.78□□□□□ -1
Cks1bP61025 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC8.78□□□□□ -1
Cks1bP61025 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cks1bP61025 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cks1bP61025 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC8.78□□□□□ -1
Cks1bP61025 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Cks1bP61025 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Cks1bP61025 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Cks1bP61025 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Cks1bP61025 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cks1bP61025 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cks1bP61025 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Cks1bP61025 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC8.78□□□□□ -1
Cks1bP61025 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC8.78□□□□□ -1
Cks1bP61025 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Cks1bP61025 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC8.78□□□□□ -1
Cks1bP61025 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cks1bP61025 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC8.78□□□□□ -1
Cks1bP61025 AC154767.3-201ENSMUST00000225150 1342 ntBASIC8.78□□□□□ -1
Cks1bP61025 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Cks1bP61025 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC8.78□□□□□ -1
Cks1bP61025 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC8.78□□□□□ -1
Cks1bP61025 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC8.77□□□□□ -1
Cks1bP61025 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1
Cks1bP61025 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Cks1bP61025 Gm43045-201ENSMUST00000198725 2095 ntBASIC8.77□□□□□ -1
Cks1bP61025 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Cks1bP61025 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC8.77□□□□□ -1
Cks1bP61025 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC8.77□□□□□ -1
Cks1bP61025 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC8.77□□□□□ -1
Cks1bP61025 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cks1bP61025 Fam71e2-202ENSMUST00000174409 2716 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Cks1bP61025 Loxl4-201ENSMUST00000026190 3738 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms